Transcript Information: S_Transcript_155489.p1


Annotated TAIR IDAT5G40020.1
Annotated Gene NamePathogenesis-related thaumatin superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16022896-16024294 | Reverse length=256
E-Value1.3E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.49101478293691
Replicate 20.24423752277692
Replicate 30.68054376692253
Condition 2: 8 Hour
Replicate 10.94429772621991
Replicate 21.5685059931912
Replicate 30.86521890647526
Condition 3: 24 Hour
Replicate 10.56425898315188
Replicate 21.0035636122368
Replicate 31.2099135692491


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_155489.p1 GENE.S_Transcript_155489~~S_Transcript_155489.p1 ORF type:complete len:271 (+),score=18.30,Thaumatin|PF00314.13|3.1e-68 S_Transcript_155489:42-854(+)
ATGGCAACCATAATGAAGCTCCCTGTAGTTGGCATTAGTTTCCAGATTATACTTTGGCATTTACTTGTATCCGTTGCAGGAGTAAGAGGACACATAGTATCAATTGTGGTGACCAACAACTGCCCCTTCCCTATATGGCTAGCAACAGCACCCAACACAGGTCATCCTGTAATAGCAAATGGTGGGTTCTACCTGGAGCCAGATCATTGGGTCGTAATCCAAGCCCCTTGGGACTGGAGTGGCCGAATTTGGGCCCGAACCGGCTGCTATTTCAGAGCCCAATCCAACTACACTTGGCAACCCGCTTGCGAGACAGGTGATTGTGATGGGCGCTTTGCCTGCAATGGGCTTATAGGCGGCCCACCAGCAACGCTGGTGGAGCTAACCCTTCGTACGGACAAAGCCCAGCCCAGTTACTACGATGTGAGCCTAGTGGACGGGTATAACCTACCCGTTACAGTATCGGCCCGGCCCAATAGGGACTCAAAGTGCTATATTGGAGGATGTGTAAGGGACATAAAAAGGAATTGCTCAATAGAGCTAGAAGTGAAGAACAAGCAAGGAAGTGTGGTGGCTTGTAAAAGTGCTTGCCTTGCTTTTAATTGGGACAGATTTTGTTGTAGGAATGAATATGGAAATCCAGACAAGTGTCCACCAAGCTTATACTCTCGTGTTTTCAAGACTGCTTGTCCTTATTTTAGCTATGCTTTTGATTCTCCATCTCCTTTGATTAGTTGCTTGGTGAAGGAGCTTGAGATCACCTTTTGTCCTGCAAAATGGGGTGATGGCTCCAATAAGAGTGCTTCTATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_155489.p1 GENE.S_Transcript_155489~~S_Transcript_155489.p1 ORF type:complete len:271 (+),score=18.30,Thaumatin|PF00314.13|3.1e-68 S_Transcript_155489:42-854(+)
MATIMKLPVVGISFQIILWHLLVSVAGVRGHIVSIVVTNNCPFPIWLATAPNTGHPVIANGGFYLEPDHWVVIQAPWDWSGRIWARTGCYFRAQSNYTWQPACETGDCDGRFACNGLIGGPPATLVELTLRTDKAQPSYYDVSLVDGYNLPVTVSARPNRDSKCYIGGCVRDIKRNCSIELEVKNKQGSVVACKSACLAFNWDRFCCRNEYGNPDKCPPSLYSRVFKTACPYFSYAFDSPSPLISCLVKELEITFCPAKWGDGSNKSASI*

Click here to download the sequence:
Link to NCBI Protein BLAST