Transcript Information: S_Transcript_155490.p1


Annotated TAIR IDAT5G40020.1
Annotated Gene NamePathogenesis-related thaumatin superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16022896-16024294 | Reverse length=256
E-Value3.2E-107
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0004887682399
Replicate 20.41471408942697
Replicate 30.1386671885985
Condition 2: 8 Hour
Replicate 11.3629008849296
Replicate 21.8503032709548
Replicate 30.64107812345809
Condition 3: 24 Hour
Replicate 10.98548346574109
Replicate 20.68161839327361
Replicate 31.0430168738958


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_155490.p1 GENE.S_Transcript_155490~~S_Transcript_155490.p1 ORF type:complete len:266 (+),score=15.13,Thaumatin|PF00314.13|1.2e-69 S_Transcript_155490:42-839(+)
ATGGCAACCATAATGAAGCTCCCTGTAGTTGGCATTGGTTTCCAGATTATGCTTTGGCAATTACTTGTATCCGGAGTAAGAGGACACATAGTATCGATTGTGGTGACCAACAACTGCCCCTTCCCTATATGGCTAGCAACAGCACCCAACACAGGTCATCCTGTAATAGCAAATGGTGGGTTCTACCTGGAGCCAGATCATTGGGCCGTAATCCAAGCACCTTGGGACTGGAGCGGCCGAATTTGGGCCCGAACCGGCTGCTATTTCAGAGCCCAATCCAACTACACTTGGCAAACCGCTTGCGAGACAGGCGACTGTGATGGACGTTTTGCTTGCAATGGGCTTATAGGCAGCCCACCAGCAACGCTGGTGGAGCTAACCCTTCGTACGGACAAAGCCCAGCCCAGTTACTACGATGTGAGCCTAGTGGACGGGTATAACCTACCCGTTACAGTATCGGCCCGGCCCAATAGGGACTCAAGGTGCTCTATTGGAGGATGTGTAAAGGACATAAAATGGAATTGCCCAATAGAGCTACAAGTGAAGAACAAGCAAGGAAGTGTGGTGGCTTGTAAAAGTGCTTGCCTTGCTTTTAATTGGGACAGATTTTGTTGTAGGAATGAATATGGAAATCCAGACAAGTGTCCACCAAGCTTATACTCTCGTGTTTTCAAGACTGCTTGTCCTTATTTTAGCTATGCTTTTGATTCTCCATCTCCTTTGATTAGTTGCTTGGTGAAGGAGCTTGAGATCACCTTTTGTCCTGCAAAATGGGGTCATAGCTCCAATAAGATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_155490.p1 GENE.S_Transcript_155490~~S_Transcript_155490.p1 ORF type:complete len:266 (+),score=15.13,Thaumatin|PF00314.13|1.2e-69 S_Transcript_155490:42-839(+)
MATIMKLPVVGIGFQIMLWQLLVSGVRGHIVSIVVTNNCPFPIWLATAPNTGHPVIANGGFYLEPDHWAVIQAPWDWSGRIWARTGCYFRAQSNYTWQTACETGDCDGRFACNGLIGSPPATLVELTLRTDKAQPSYYDVSLVDGYNLPVTVSARPNRDSRCSIGGCVKDIKWNCPIELQVKNKQGSVVACKSACLAFNWDRFCCRNEYGNPDKCPPSLYSRVFKTACPYFSYAFDSPSPLISCLVKELEITFCPAKWGHSSNKI*

Click here to download the sequence:
Link to NCBI Protein BLAST