Transcript Information: S_Transcript_155595.p1


Annotated TAIR IDAT3G26782.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9850594-9852682 | Forward length=659
E-Value1.3E-212
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9429846034534
Replicate 21.51315592098
Replicate 31.7953105922089
Condition 2: 8 Hour
Replicate 13.5385050304977
Replicate 23.415171584383
Replicate 32.7352193829401
Condition 3: 24 Hour
Replicate 11.2082347063382
Replicate 21.7549411618853
Replicate 31.9530344119006


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_155595.p1 GENE.S_Transcript_155595~~S_Transcript_155595.p1 ORF type:complete len:452 (+),score=88.78,DYW_deaminase|PF14432.2|1.7e-42,PPR|PF01535.16|0.012,PPR|PF01535.16|4.8e-07,PPR|PF01535.16|1.8e+03,PPR|PF01535.16|1.7e-05,PPR|PF01535.16|8.5e-08,PPR|PF01535.16|0.14,PPR|PF01535.16|0.011,PPR|PF01535.16|2.2e+02,PPR|PF01535.16|9.1,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|1.2e-06,PPR_2|PF13041.2|2.8e-05,PPR_2|PF13041.2|1.3e-11,PPR_2|PF13041.2|2.5,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|1.3e+02,PPR_2|PF13041.2|7.7e+03,PPR_3|PF13812.2|14,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|70,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|0.0075,PPR_3|PF13812.2|0.058,PPR_3|PF13812.2|0.05,PPR_3|PF13812.2|1.4,PPR_1|PF12854.3|1,PPR_1|PF12854.3|0.077,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|0.075,PPR_1|PF12854.3|48,PPR_1|PF12854.3|0.058,PPR_1|PF12854.3|2e+03 S_Transcript_155595:187-1356(+)
ATGGATGTGTTCCGTTCCATGGTGAATGATAGTGATGTAAAATATAATGCTGTGACTTTGTCTGCTGTCTTGCTGGCCTGTGCTCATGCTGGGGCTTTGGTGCTTGGCAAGTGTATACACGATCAGGTTGTTAAGATGGGATTAGAAGAGAATTTTTATGTGGGGACTTCAATTATAGACATGTATTGCAAATGTGGGAGAGTCGCAATGGCAAGGAAAGCATTTGACCGCATGAAGAAGAAGAATGTGAAGACCTGGAGTGCAATGATTGCTGGATATGGTATGCATGGTTATGCTAGAGAAGCACTGGATGTTTTCTATGATATGAAAAGAGCAGGAGTAAAGCCAAATTACATAACCTTTGTGTCAGTTCTAGCCGCTTGTAGCCATGCAGGTTTTGTTGAAGAAGGGTGGGACTGCTTCACAACTATGAGAAAAGAATTTGATGTAGAGCCTGGGGTTGAGCACTATGGTTGTATGGTCGATCTTTTTGGTCGTGCTGGTTCTCTTCAGAAGGCTTTTTATTTGATTAAGGAGATGGCTGTTAAGCCTGATTTTGTGGTGTGGGGTGTTCTCTTAGCTGGGTGCAGGATGCATAAAAATTTGGAGCTAGCAGAAATATCAGCACGAAAATTGTTCGAGTTAGACCCAAGTGATTGTGGGTACTATGTCTTGCTCTCAAATATGTATGCTGATGCTGGAAGGTGGGACGATGTAGAAAGAATCAGAATTTTCATGAAGAATCATGGGTTGATGAAACCGCCAGGATTTAGTTTAGTGGAATTGAAAGGGAGAGTTCACGTGTTTCTGGTTGGCGATAAAGAACATCCTCAACACAAGCAAATTTATGAGTACCTGGAAAAGCTATATGTCAAACTGCAAGAAGCCGGATACATACCTGATAAGACATCGGTTTTTCACGATGTTGACGAAGAAGAAAAGGAGATAGTCCTACGAGCTCACAGCGAAAAGCTTGCAGTTGCTTTTGGACTTATGAACACAGTTCCTGGTACTACAATCCAAGTCATTAAGAACCTGAGAGTCTGTGGTGACTGTCACACTGTGATAAAGCTGATATCCAAGGTTGTTTACCGAGAGATTGTGGTCAGAGATTCTAAACGCTTCCACCATTTCAAAGATGGTTCTTGTTCATGTGGTGACTATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_155595.p1 GENE.S_Transcript_155595~~S_Transcript_155595.p1 ORF type:complete len:452 (+),score=88.78,DYW_deaminase|PF14432.2|1.7e-42,PPR|PF01535.16|0.012,PPR|PF01535.16|4.8e-07,PPR|PF01535.16|1.8e+03,PPR|PF01535.16|1.7e-05,PPR|PF01535.16|8.5e-08,PPR|PF01535.16|0.14,PPR|PF01535.16|0.011,PPR|PF01535.16|2.2e+02,PPR|PF01535.16|9.1,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|1.2e-06,PPR_2|PF13041.2|2.8e-05,PPR_2|PF13041.2|1.3e-11,PPR_2|PF13041.2|2.5,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|1.3e+02,PPR_2|PF13041.2|7.7e+03,PPR_3|PF13812.2|14,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|70,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|0.0075,PPR_3|PF13812.2|0.058,PPR_3|PF13812.2|0.05,PPR_3|PF13812.2|1.4,PPR_1|PF12854.3|1,PPR_1|PF12854.3|0.077,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|0.075,PPR_1|PF12854.3|48,PPR_1|PF12854.3|0.058,PPR_1|PF12854.3|2e+03 S_Transcript_155595:187-1356(+)
MDVFRSMVNDSDVKYNAVTLSAVLLACAHAGALVLGKCIHDQVVKMGLEENFYVGTSIIDMYCKCGRVAMARKAFDRMKKKNVKTWSAMIAGYGMHGYAREALDVFYDMKRAGVKPNYITFVSVLAACSHAGFVEEGWDCFTTMRKEFDVEPGVEHYGCMVDLFGRAGSLQKAFYLIKEMAVKPDFVVWGVLLAGCRMHKNLELAEISARKLFELDPSDCGYYVLLSNMYADAGRWDDVERIRIFMKNHGLMKPPGFSLVELKGRVHVFLVGDKEHPQHKQIYEYLEKLYVKLQEAGYIPDKTSVFHDVDEEEKEIVLRAHSEKLAVAFGLMNTVPGTTIQVIKNLRVCGDCHTVIKLISKVVYREIVVRDSKRFHHFKDGSCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST