Transcript Information: S_Transcript_155713.p1


Annotated TAIR IDAT5G66090.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26425831-26426955 | Forward length=210
E-Value5E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2595944444965
Replicate 23.0180230998487
Replicate 33.0447913345567
Condition 2: 8 Hour
Replicate 13.7218841591223
Replicate 21.3718586430021
Replicate 31.1060109606358
Condition 3: 24 Hour
Replicate 11.7517123553778
Replicate 23.7416670055291
Replicate 32.9742976892826


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_155713.p1 GENE.S_Transcript_155713~~S_Transcript_155713.p1 ORF type:5prime_partial len:212 (+),score=36.13 S_Transcript_155713:2-637(+)
GCGGCTGAGAATGTTCTCGTAGCCCTCGGGTCTCTACCCACAGACACAGTCACCAACACCATAACAGGGGCGTCCTCCCTATTCTCCTTAATTGCAGCTGCTCACCATTTACTTGATCAATCAATGGCTTTCTCACACTACTTAGTTGCAGCTGCTCCTGTTGAACCCTCTCTCACTTCCAGAATTTCACTTCGAAATGCTCTAACTTTAGTTTCAGCATACCGCCTTTCTTCACCTTCTACTACCGTGCCGCTCAATTTTGACGCTCGTAGTATCTCCCTTGTATCCAGCTTCTGCAGAACCAACCGTTGCGTTAAAGCTAAGGCTCAAGAATCTGAAGCCAGTGTAGATGTGGATGCATTTACTCATTTCAAACATTTGCTTCTCCCAATAACAGATCGAAATCCATACCTTTCTGAGGGAACAAGACAGGCTGCTGCAACAAGTGCTGCATTGGCAAAGAAGTATGGAGCTGATATAACAGTTGTAGTTATTGATGAGAAGCCAAAAGAGTCACACCCTGAGCATGATACTCAGCTTGCCAGCATCCGTTGGCACTTGTCTGAAGATGTAATTCATGAAGACTGGAGCAAACCATATTTTGTGGTGCTTGATCCCATAAGTTATTTGGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_155713.p1 GENE.S_Transcript_155713~~S_Transcript_155713.p1 ORF type:5prime_partial len:212 (+),score=36.13 S_Transcript_155713:2-637(+)
AAENVLVALGSLPTDTVTNTITGASSLFSLIAAAHHLLDQSMAFSHYLVAAAPVEPSLTSRISLRNALTLVSAYRLSSPSTTVPLNFDARSISLVSSFCRTNRCVKAKAQESEASVDVDAFTHFKHLLLPITDRNPYLSEGTRQAAATSAALAKKYGADITVVVIDEKPKESHPEHDTQLASIRWHLSEDVIHEDWSKPYFVVLDPISYLE*

Click here to download the sequence:
Link to NCBI Protein BLAST