Transcript Information: S_Transcript_155724.p1


Annotated TAIR IDAT5G66520.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26551879-26553741 | Forward length=620
E-Value3E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57576204595342
Replicate 20.79553327731424
Replicate 31.5073390068327
Condition 2: 8 Hour
Replicate 11.9479923847381
Replicate 21.9898038453603
Replicate 31.6909206032798
Condition 3: 24 Hour
Replicate 10.78767608740123
Replicate 20.38136221402508
Replicate 30.54566922991838


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_155724.p1 GENE.S_Transcript_155724~~S_Transcript_155724.p1 ORF type:complete len:416 (+),score=70.10,PPR|PF01535.16|3.4,PPR|PF01535.16|0.00094,PPR|PF01535.16|71,PPR|PF01535.16|0.1,PPR|PF01535.16|2.7e-07,PPR|PF01535.16|7.6e-09,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|1.9e-06,PPR|PF01535.16|8.9e-07,PPR|PF01535.16|1.6,PPR|PF01535.16|0.12,PPR_2|PF13041.2|1.7e+02,PPR_2|PF13041.2|4.1e-11,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|4.1e-05,PPR_2|PF13041.2|6.2e-12,PPR_2|PF13041.2|9.4e-06,PPR_2|PF13041.2|4.8e-10,PPR_2|PF13041.2|7.8,PPR_2|PF13041.2|1.1e+02,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|0.042,PPR_1|PF12854.3|2.6,PPR_1|PF12854.3|3.2e+02,PPR_1|PF12854.3|11,PPR_1|PF12854.3|1.2e-06,PPR_1|PF12854.3|0.00055,PPR_1|PF12854.3|6.9e-06,PPR_1|PF12854.3|0.059,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|0.078,PPR_3|PF13812.2|5.6e+02,PPR_3|PF13812.2|0.92,PPR_3|PF13812.2|1.6e+03,PPR_3|PF13812.2|25,PPR_3|PF13812.2|0.03,PPR_3|PF13812.2|7.7e-06,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|0.42,PPR_3|PF13812.2|0.065,PPR_3|PF13812.2|0.074,PPR_3|PF13812.2|33 S_Transcript_155724:199-1446(+)
ATGTTGACTCCTCTTTCTAGCTCAGCTGTGATAGCTGCTCCTGCTCCACCCTTAGTTGGTAACCCCACTCCACTACAAAGGCTAGACAAATGTTCATCCATGTCTGAGCTCAAGCAATTCCACTCCCAAATCATCCGCCTTGGCCTCTCACCTGACAACGATATCATGGGAAGAGCCATCAAGTTCTGTGCCTTGTCAAAATTTGGTGACTTGGGTTATGCACACCAACTGTTTGATGAAATGCCGCACCCAGATGCATTCATCTACAACACCCTCATTAGGGGCTACTTGCAATGCCACTTGGCCAGGGAATGCTTTCTTTTGTATCTCCGAATGTTGGAGGCCTCTGTTATGCCCAACAACTTCACCTACCCCTCCCTTATCAGATGTTGTTGCTTTCACAATGATTGGGTTGAACAAGGGCGGCAAATCCATGCTCATGTGGTGAAAATTGGGTTCACAGATGACGGATTTTGTCAGAACAATTTGATTTACATGTATGTGAGTTTTGGGTATTTGGGAGAAGCTCGAAGGGTGTTCGATACCATGTCTCGTAAGGATGCTATCTCTTGGACTACCTTGATCAGTGGGTATTCTCAATTGGGTCTTGTAAATGATGCCTTTGAAGTGTTTAGATTGATGCCTAATAAAAATTCTGCTGCTTGGAATGCGATGATAGCTGCATATGTTAAACATAACCGCTTTCATGAGGCATTTTCTTTGTTCAATGAAATGAGGGCTGAGAATATAGAGTTGGATAAGTATGTGATAGCTAGTATGTTATCTGCTTGTACAGGACTGGGAGCTTTGGACCAAGGAGAGTGGATACATGGATATATCAAGAAGAATGGGATAGAAATGGACACGAAACTCGCAACAACAATCATCGATATGTATTGCAAGTGTGGCTACTTAGAGAAGGCATTTGAAGTCTTCAATGAGTTGGATTGTAAAGGAATTTCGACATGGAACTGCATGATTGGTGGATTAGCAATGCATGGGAAAGGACAAGCTGCCATAGATCTTTTCAAGGACATGGAAAGAGAGATGGTAGTTCCTGATAACATCACTTTCTTGAACGTTCTCAATGCGTGTGCTCATTCAGGGTTGGTCGAGACAGGCCGCCATTACTTCAAGTATATGACTGAAGTTCATGGCATTCAGCCTGGAACAGAACATTATGGGTGCATGGTTGATTTGTTGGGTAGAGCTGGATTGCTAAAAGAGGCACGAGAGCTCATTGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_155724.p1 GENE.S_Transcript_155724~~S_Transcript_155724.p1 ORF type:complete len:416 (+),score=70.10,PPR|PF01535.16|3.4,PPR|PF01535.16|0.00094,PPR|PF01535.16|71,PPR|PF01535.16|0.1,PPR|PF01535.16|2.7e-07,PPR|PF01535.16|7.6e-09,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|1.9e-06,PPR|PF01535.16|8.9e-07,PPR|PF01535.16|1.6,PPR|PF01535.16|0.12,PPR_2|PF13041.2|1.7e+02,PPR_2|PF13041.2|4.1e-11,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|4.1e-05,PPR_2|PF13041.2|6.2e-12,PPR_2|PF13041.2|9.4e-06,PPR_2|PF13041.2|4.8e-10,PPR_2|PF13041.2|7.8,PPR_2|PF13041.2|1.1e+02,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|0.042,PPR_1|PF12854.3|2.6,PPR_1|PF12854.3|3.2e+02,PPR_1|PF12854.3|11,PPR_1|PF12854.3|1.2e-06,PPR_1|PF12854.3|0.00055,PPR_1|PF12854.3|6.9e-06,PPR_1|PF12854.3|0.059,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|0.078,PPR_3|PF13812.2|5.6e+02,PPR_3|PF13812.2|0.92,PPR_3|PF13812.2|1.6e+03,PPR_3|PF13812.2|25,PPR_3|PF13812.2|0.03,PPR_3|PF13812.2|7.7e-06,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|0.42,PPR_3|PF13812.2|0.065,PPR_3|PF13812.2|0.074,PPR_3|PF13812.2|33 S_Transcript_155724:199-1446(+)
MLTPLSSSAVIAAPAPPLVGNPTPLQRLDKCSSMSELKQFHSQIIRLGLSPDNDIMGRAIKFCALSKFGDLGYAHQLFDEMPHPDAFIYNTLIRGYLQCHLARECFLLYLRMLEASVMPNNFTYPSLIRCCCFHNDWVEQGRQIHAHVVKIGFTDDGFCQNNLIYMYVSFGYLGEARRVFDTMSRKDAISWTTLISGYSQLGLVNDAFEVFRLMPNKNSAAWNAMIAAYVKHNRFHEAFSLFNEMRAENIELDKYVIASMLSACTGLGALDQGEWIHGYIKKNGIEMDTKLATTIIDMYCKCGYLEKAFEVFNELDCKGISTWNCMIGGLAMHGKGQAAIDLFKDMEREMVVPDNITFLNVLNACAHSGLVETGRHYFKYMTEVHGIQPGTEHYGCMVDLLGRAGLLKEARELIE*

Click here to download the sequence:
Link to NCBI Protein BLAST