Transcript Information: S_Transcript_156118.p1


Annotated TAIR IDAT5G55960.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0118 (InterPro:IPR002549); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22662726-22664762 | Forward length=648
E-Value2E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.354739675233
Replicate 23.2044452278861
Replicate 31.3547251881109
Condition 2: 8 Hour
Replicate 12.4209124233139
Replicate 21.0084138785853
Replicate 32.6333434436872
Condition 3: 24 Hour
Replicate 10.65644057233839
Replicate 21.6269514153305
Replicate 33.3264465909919


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_156118.p1 GENE.S_Transcript_156118~~S_Transcript_156118.p1 ORF type:3prime_partial len:599 (+),score=71.13 S_Transcript_156118:66-1859(+)
ATGGGATCAGTCCCTTGTTCTGTCACCGAAAGCTCTTCAAAGCCTGCCAGTCTACCTTGGAAGGACATGTATAGATCAGCTTCCTTTCGGATGCCTAAATCAGACCCTTTTTCTGCGACTCAAACTGACACCTCTCAGGAATTACGCGAACTTCAAGTTACTGAGACAGGTGATGAAAATGTATGCAATCACAACCTTTCTCAGATTAAAGGCGCTCAGCGGTCTCATTCAATGGACCACCATCAGCGATGCAACCTCAACCTCAATCTCGACCAAAATTCTTCCACCGTGCCTTGGGAAGCCATGTTTCGTTCTGCTTCTTTCAGAAGGTCTAATTTATCTCCTCGAGATCAAATTCCTACGATGGAGCACCAAACTCCAGTGGAAGAAATCAACACTGAATCGGCATCACCCGAGAATTCTGCAGATAGTGCGATGAAATCAGAAGACAGCGCTGGGACAAGTACACCTGCAGAGACTTCAGAAACCAAGGAAATGTTATCTCAACTGAAGACTACTTCTCGTTGTGATTCTCCTATGTTGCTTGCTTTGTATGTTACCTTAGCTCAAGCAGGACTAGCCCTTGTGATATTTCTGTTTTACGGATTCTTCAAATTGCTCGAAGAATATATTCGTCCGATTATTTGGGCAGCCTTGTGTTCAATTCCTTTGAGAGGAATCCAAGACATTCTCATCGATTTCTGGGCTGAGCCATTGACAGGTGGACTGATAGACACCTTTTTGGCAGTTCCAGTAGCTGTATTAAGGGCTTGTTCGGGTACAATAATTGATGCCCGTGAAGTGTTTTCTTGGGTCTTCTATGGTGAGAAGCTGGAGGATGTAACAACAGAGAAAAATGACTTCCTGAGACTGTTCCGAAGGCTGGTTTCATTCAGTCTGTTTGTGTTTGCTTATGAGCAGATTGGCAGGTTTGGGGCTTGCACTCTCATCGGAGTAGCCTTCATGTTCAGCTCTAACCTCTCCTCGTCAACTATATCCGCAGTTTCTACTTTACAAAGTGACAGTTTTCGGTTAAGGTGCAACCGTACTAGTTGCTCATCACCAGAAAGCAGCCAGAAACTTCATCTACATAAGATTGGCAAGGTTATCAGTCACTGGATTCTGAGCAGGCTGAAAACAATATTAGCTGTGGCATTGATTGTTCTAATGATCATTGGAACAATAGCTGGTGTAATCTTCTTTTCGTACCAGATAGGAGCCGAAGGAAAGGATGCAGTGATTTCGATCAAATCCCACATTGAGGACAGCAAGTATGCAGAGAAGCTCGGTATCAAGAAATGGATATATGAGAACAATGCCATGGAGCTGATGGATTGGTACACTTCCGAATGCTATGGAACTCTATTACAGCAAATAGACACTTTTGCCTCCAAATACAACTTGTCAGAGCTTGTTGAAGTACTGAAGCAATTTGTGATCACCCCATACACCAATTTCTCCGAAACGCAGGAAACAAAGTACACATTGAAGCTCGGAAATCTGATGGAGAAGCCGGTTTTAGACAAGGCAAAGTGCTTTGCAACTCAAGGAATGGATCTTTCCTTCCGAATATTGGCAAGCAGTAAGTTTATCCTAGATGGAAGCGCGCATTTCCTGCTCTACATAGGCCAATCGATGGTGTCGGGAGCAGCAGGACTAGTGCAGTTTCTGATACAATCAACTGTATTTTTCTGGGTTCTGTACTATCTTCTGACATCAGAATCCGGTGGAGTGACCAAGCAAATCATGAAAATCATACCAGCACCAACATCTACGAAAACCCGATGTGTTCAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_156118.p1 GENE.S_Transcript_156118~~S_Transcript_156118.p1 ORF type:3prime_partial len:599 (+),score=71.13 S_Transcript_156118:66-1859(+)
MGSVPCSVTESSSKPASLPWKDMYRSASFRMPKSDPFSATQTDTSQELRELQVTETGDENVCNHNLSQIKGAQRSHSMDHHQRCNLNLNLDQNSSTVPWEAMFRSASFRRSNLSPRDQIPTMEHQTPVEEINTESASPENSADSAMKSEDSAGTSTPAETSETKEMLSQLKTTSRCDSPMLLALYVTLAQAGLALVIFLFYGFFKLLEEYIRPIIWAALCSIPLRGIQDILIDFWAEPLTGGLIDTFLAVPVAVLRACSGTIIDAREVFSWVFYGEKLEDVTTEKNDFLRLFRRLVSFSLFVFAYEQIGRFGACTLIGVAFMFSSNLSSSTISAVSTLQSDSFRLRCNRTSCSSPESSQKLHLHKIGKVISHWILSRLKTILAVALIVLMIIGTIAGVIFFSYQIGAEGKDAVISIKSHIEDSKYAEKLGIKKWIYENNAMELMDWYTSECYGTLLQQIDTFASKYNLSELVEVLKQFVITPYTNFSETQETKYTLKLGNLMEKPVLDKAKCFATQGMDLSFRILASSKFILDGSAHFLLYIGQSMVSGAAGLVQFLIQSTVFFWVLYYLLTSESGGVTKQIMKIIPAPTSTKTRCVQ

Click here to download the sequence:
Link to NCBI Protein BLAST