Transcript Information: S_Transcript_156578.p1


Annotated TAIR IDAT2G27600.1
Annotated Gene NameAAA-type ATPase family protein
Annotated Gene Symbol(s)SKD1, VPS4, ATSKD1
Annotation TypeOrtholog
Chromosome Positionchr2:11781226-11783730 | Forward length=435
E-Value2E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.68826727332363
Replicate 20.19019646170271
Replicate 30.31797820833794
Condition 2: 8 Hour
Replicate 10.55151871509827
Replicate 20.38572152827115
Replicate 30.36751461387899
Condition 3: 24 Hour
Replicate 10.37663592225162
Replicate 20.19537768600299
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_156578.p1 GENE.S_Transcript_156578~~S_Transcript_156578.p1 ORF type:internal len:116 (+),score=39.38 S_Transcript_156578:1-345(+)
CTTAGGTTCGAGAAGAACCCCAATATTCGCGAAGCCATCACTCAGAAATTCACCGAGTATCTCCACCGTGCTGAGGAGATTCGCGCTGTTCTTGATGACGGCGGCGGCTCTGGTCGGGCATCCTATGGTGCTGATGCTGCCGTCGCTGCTTGGCCGAAGGGGAAACTGAAGGATGGTGGTGAGGGAGAAGATGCTGAGCAATCGAAGTTGAGAGCTAGATTGAATTCTGCTATTATTAGGGAAAAGCCGAATGTTAAGTGGAATGATGTGGCTGGTTTGGAGAGTGCTAAACAGGCCTTGCAAGAGGCTGTTATCCTGCCTGTGAAGTTTCCTCAGTTCTTCACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_156578.p1 GENE.S_Transcript_156578~~S_Transcript_156578.p1 ORF type:internal len:116 (+),score=39.38 S_Transcript_156578:1-345(+)
LRFEKNPNIREAITQKFTEYLHRAEEIRAVLDDGGGSGRASYGADAAVAAWPKGKLKDGGEGEDAEQSKLRARLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFT

Click here to download the sequence:
Link to NCBI Protein BLAST