Transcript Information: S_Transcript_156775.p1


Annotated TAIR IDAT4G10340.1
Annotated Gene Namelight harvesting complex of photosystem II 5
Annotated Gene Symbol(s)LHCB5
Annotation TypeOrtholog
Chromosome Positionchr4:6408200-6409496 | Forward length=280
E-Value8.6E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.149025894772
Replicate 212.153231535919
Replicate 312.972433007956
Condition 2: 8 Hour
Replicate 12.8915783480858
Replicate 24.1710226277456
Replicate 32.5289988683876
Condition 3: 24 Hour
Replicate 122.585388015699
Replicate 221.895546777149
Replicate 311.542291507426


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_156775.p1 GENE.S_Transcript_156775~~S_Transcript_156775.p1 ORF type:internal len:118 (+),score=7.88 S_Transcript_156775:3-353(+)
AGCTTATCCACGCCCGGTGGGCTATGCTTGGTGCAGCTGGGTTCATCATTCCAGAGGCTTTCAACAAATTCGGTGCTAACTGTGGCCCTGAAGCTGTTTGGTTCAAGGTCCTTGTTTAACTTCTTTTATTCCCTTGAAACTACTAGTAAATTTTTTTTTCCTATCTATATGAGTATGTTCTATATAGTCAATGATTTTGGGGTTCTAGATTGTACTAATTATATAAGATGGGTAATAATTAAACTGCAGACTGGTGCCCTGCTCTTGGATGGAAACACCCTTAACTACTTTGGGAAGAACATCCCCATCAATCTCATTGTCGCCGTTGTTGCTGAGGTTGTTCTTGTTGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_156775.p1 GENE.S_Transcript_156775~~S_Transcript_156775.p1 ORF type:internal len:118 (+),score=7.88 S_Transcript_156775:3-353(+)
SLSTPGGLCLVQLGSSFQRLSTNSVLTVALKLFGSRSLFNFFYSLETTSKFFFPIYMSMFYIVNDFGVLDCTNYIRWVIIKLQTGALLLDGNTLNYFGKNIPINLIVAVVAEVVLVG

Click here to download the sequence:
Link to NCBI Protein BLAST