Transcript Information: S_Transcript_156860.p1


Annotated TAIR IDAT4G38640.1
Annotated Gene NamePlasma-membrane choline transporter family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:18059884-18062091 | Reverse length=556
E-Value2.7E-255
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.579565194454
Replicate 223.44171390486
Replicate 322.855819360748
Condition 2: 8 Hour
Replicate 137.547919379809
Replicate 239.829880524656
Replicate 338.901421879091
Condition 3: 24 Hour
Replicate 121.727857329037
Replicate 219.709421853002
Replicate 319.862359969029


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_156860.p1 GENE.S_Transcript_156860~~S_Transcript_156860.p1 ORF type:complete len:560 (+),score=69.21,Choline_transpo|PF04515.8|5.5e+03,Choline_transpo|PF04515.8|1.6e+04,Choline_transpo|PF04515.8|2.4e-57 S_Transcript_156860:230-1909(+)
ATGGCAGGCAGTGAAGAACCCAACAAACCCTCCAATCTATATGACCCTCCATCTTCACCTACTCAGCCTCTCCTTTCCAAACCCTACCCTTCTCCTTCCATTGAAGAACACCAACCATCTTATATTTCTTCCACTTCTCAATCTGAACAACCTGACCGTACCCAGTTCCTTCAAATCTCTTACAATTATGGCCCTAGACCTTTCAAAGACTTAACCTTTCTTATCCTTTTTATCCTTTTGTCTTTATCCACTTTTGCCTTTGGTATTTTCTCCATTGCCCATCACAATTCTCACCACTCTTCAATCTCTTCTTTCTCTTATGACCCCACTTCCTCTTCTTGTATCCAAAAAACAACACTTTCCCATGATGGGTCTTTCTCAGTTTTTCTTTCTGGGTTTTCCAATTTTGTGTCTGCTAATGATGAAAGTTCAGGTTTTGTTAGGGGTTTGATTTGGGTTCTTGTGATTACCTTCATTTTGAGCTTGCCCCTTATCTGGGTTTTGTTGTTGTTGCTTAAACATTTCACTAAGCATCTTGTTTATGCTTCACTGCCTTTCTTTATTTTGATTCCTGTGGGAGTAAATGTGTATTGGTTTGTTGCTTGCACTGTTAGTTCCTCTTGTAGTGATGCTTTGCCCCTTGCTTATAGGATACTTTTGTTGCTCTTCGTTTTCTTGGTTGTTGGGATTATTGTGTGGATATTTGTGCTCAATTGGCATCGAGTTGAGTTGACTATAAATATAGTTGGGGTGGCCGCAAATGCCCTCTCGAGGAATTTAGGTTTGTTTGGGGTTGTCCCTTGTTTGAAGTTGGGGTTGTTGGTTTATTATGTGCCTATTGTTGTGTTCTTGGTGTTTGCAAGGTGGAATGGGAAGATTGTTCCAAAAGAATCGAGGGGAGAGTATTCTTGTGGTTGGAAGCAAGATGGGTGGGTTCCTGCTTATTATGCATTGGCTATTCTTACTATGTTGTGGTCCGCGACCGTGATGGTGGAGACTAAAGCTTATGTGATTAGTGCCACTATTTCTCAGTGGTATTTCGCTAAGGATGATTCGACCCCAAAAAGGAAGATCAGAAGCTCTTTGAGGAATGCTTTTGGGCCCTCAGCCGGAACTATATGCTTCTCTGGACTACTAATTTGTGTTGTCCGCATGGTACGTGCCGCTGTAGATAGTGCAAGACGAGAGGATGCTACTGGAATAGTGAACGTTGTCCTACGGTGTTGTGTTAATTTATTGCTGGTGGCTGTAGATTTTTTGAACAAATTCACAGTCAACTTTGCAGCTATCACAGGCGAAGCTTATTGTACATCTGCAAGGATGACATATGAGCTTCTGAAACGTAATCTTCTGTCGCCCGTTTTTGTGGAGACCATATCTACACGTTTACTGGGTGGAATCATCTTTGTCCTTTCGGCAATATACGCAGTTGTGGTCTGTGCTATCCTAAATGGCGCAACTAATCTTGGGGTGTACTCCTATTATGTCTCCCTCTTGGCATGGGCGTTGCTTATGCTGGTGCTCGGTTTCTTTGTGCATTTGCTCGAAAACGTCATTGACACAATTTATGTGTGCTATGCCATCGACCGAGACCGAGCAGAGGTTTGTAAACCAGAGGTTCATGATGTTTATGTTCATCTTCCTATTACCAGGGGCCACCGGACTCCACTCAATGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_156860.p1 GENE.S_Transcript_156860~~S_Transcript_156860.p1 ORF type:complete len:560 (+),score=69.21,Choline_transpo|PF04515.8|5.5e+03,Choline_transpo|PF04515.8|1.6e+04,Choline_transpo|PF04515.8|2.4e-57 S_Transcript_156860:230-1909(+)
MAGSEEPNKPSNLYDPPSSPTQPLLSKPYPSPSIEEHQPSYISSTSQSEQPDRTQFLQISYNYGPRPFKDLTFLILFILLSLSTFAFGIFSIAHHNSHHSSISSFSYDPTSSSCIQKTTLSHDGSFSVFLSGFSNFVSANDESSGFVRGLIWVLVITFILSLPLIWVLLLLLKHFTKHLVYASLPFFILIPVGVNVYWFVACTVSSSCSDALPLAYRILLLLFVFLVVGIIVWIFVLNWHRVELTINIVGVAANALSRNLGLFGVVPCLKLGLLVYYVPIVVFLVFARWNGKIVPKESRGEYSCGWKQDGWVPAYYALAILTMLWSATVMVETKAYVISATISQWYFAKDDSTPKRKIRSSLRNAFGPSAGTICFSGLLICVVRMVRAAVDSARREDATGIVNVVLRCCVNLLLVAVDFLNKFTVNFAAITGEAYCTSARMTYELLKRNLLSPVFVETISTRLLGGIIFVLSAIYAVVVCAILNGATNLGVYSYYVSLLAWALLMLVLGFFVHLLENVIDTIYVCYAIDRDRAEVCKPEVHDVYVHLPITRGHRTPLNV*

Click here to download the sequence:
Link to NCBI Protein BLAST