Transcript Information: S_Transcript_156870.p1


Annotated TAIR IDAT1G03910.2
Annotated Gene NameEXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein, cactus-binding domain, C-terminal (InterPro:IPR019134), Cactin, central region (InterPro:IPR018816); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36815.2).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:996432-1000231 | Forward length=716
E-Value9E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0609834379474
Replicate 21.2460711710224
Replicate 30.7965301298565
Condition 2: 8 Hour
Replicate 12.1963026572463
Replicate 22.3784025131935
Replicate 31.6287856973906
Condition 3: 24 Hour
Replicate 11.0886154563419
Replicate 21.5059011014184
Replicate 31.2569125118829


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_156870.p1 GENE.S_Transcript_156870~~S_Transcript_156870.p1 ORF type:5prime_partial len:301 (+),score=52.15,Cactin_mid|PF10312.5|4.9e-38 S_Transcript_156870:1-903(+)
TTGAAGAGGAGAACTGGAGAAGAGATGGGCTTCGTATGGTGGAAAAAAATAGAGAGGGATTTAGCGGAAGGTGTACCGCTGAAGGAGGTGGTCAAGGCGTCGGCAAAGAGGAAGAGAGCGGCGGTAGAGGTGGTGAAGGAGAAGAAGAAGCATAGGTCGGCGGCAAACAGAGAAGGAGAACGAATTAGGACTCATCAGCATGATGATCAAGATGATGAGATCAAGTTTTGTGTTGATCAGATTGCAATTAGGTCCAAGATTCGCCTGACTCAAGGCAGACCCAAACCCATCGATTTGCTTTTCTTTTATCACCACCTTCACATTCAAGATCATGATGCTCAGAATCATTCACATTGGAATCTCTTCGATTTCGATTTTGATTGTACTCAACCACCTTACCAGGTTTTCAAGGGTCTAACTGCTGAAAGATTGTTAGAGCTTCATGATGACATAACATTGCTTATCAACTACTTTAACAGGGTGTCTTTCCCAAACCCAATAGTAGCAAAATATTGGGACGCGCTCTTGGTGCTTTGCAAGTCTCAATTAAATGAGTTGCATGGAGGGCTTCATTCAAGTATTGCAGCAGATGTTAGAAATCTCTTGGGAAGCAAGACGTATGAAGAATTACAAGCACTGCAAACTAGCATTGATTTATTGATGCATTCTGGGAAAGCCTTTGTAGTAGAGTTCTGGGAGACTGTTCATAGATGCCTTCCAATGTACCTCGCCAAGGCTTTGTTGAATCAAGTCCATAACAATATACTAAAGCTGAGGTCCACCTGTCGAAGCTTGATACATAAGGAGGAAATTTTCACTACACATCATGAGGAAGCACCGGAAGTCAAACTGATTTCTAAGGGCCAAGACTACTCTTTTACTAGAAAGCCAAAGTTTTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_156870.p1 GENE.S_Transcript_156870~~S_Transcript_156870.p1 ORF type:5prime_partial len:301 (+),score=52.15,Cactin_mid|PF10312.5|4.9e-38 S_Transcript_156870:1-903(+)
LKRRTGEEMGFVWWKKIERDLAEGVPLKEVVKASAKRKRAAVEVVKEKKKHRSAANREGERIRTHQHDDQDDEIKFCVDQIAIRSKIRLTQGRPKPIDLLFFYHHLHIQDHDAQNHSHWNLFDFDFDCTQPPYQVFKGLTAERLLELHDDITLLINYFNRVSFPNPIVAKYWDALLVLCKSQLNELHGGLHSSIAADVRNLLGSKTYEELQALQTSIDLLMHSGKAFVVEFWETVHRCLPMYLAKALLNQVHNNILKLRSTCRSLIHKEEIFTTHHEEAPEVKLISKGQDYSFTRKPKFF*

Click here to download the sequence:
Link to NCBI Protein BLAST