Transcript Information: S_Transcript_156870.p2


Annotated TAIR IDAT1G03910.2
Annotated Gene NameEXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein, cactus-binding domain, C-terminal (InterPro:IPR019134), Cactin, central region (InterPro:IPR018816); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36815.2).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:996432-1000231 | Forward length=716
E-Value3.6E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6782973751916
Replicate 22.1864025687627
Replicate 31.8276585308073
Condition 2: 8 Hour
Replicate 13.2660507692906
Replicate 24.0309637188697
Replicate 32.3044159572953
Condition 3: 24 Hour
Replicate 11.3776052651726
Replicate 21.020892413349
Replicate 31.5905793768992


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_156870.p2 GENE.S_Transcript_156870~~S_Transcript_156870.p2 ORF type:complete len:111 (+),score=11.20,CactinC_cactus|PF09732.5|1.5e-49 S_Transcript_156870:908-1240(+)
ATGCGTGTTGGTTATGAGTGGAACAAGTACAACCGGACACATTACGACCATGATAACCCACCTCCGAAGATGGTCCAAGGCTACAAATTTGACATCTTTTACCCTGATCTCCTTGTTGAATCCAAGGTTCCAGACTACTCCATTGAAAAAGATGGGGATAGCTCCACAACGTGCATTATAAGGTTTCACGCTGGCCCGCCTTATGAGGATATAGCTTTTCGCATAGTGAATGGAGAAAGAGATTATCGTCAGAGAAAGGGCTTCAAATGCGAGTTTGAGAGTGGAATATTTCACCTGCATTTCACCTTCAAGAGGTTCCCCTATCGAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_156870.p2 GENE.S_Transcript_156870~~S_Transcript_156870.p2 ORF type:complete len:111 (+),score=11.20,CactinC_cactus|PF09732.5|1.5e-49 S_Transcript_156870:908-1240(+)
MRVGYEWNKYNRTHYDHDNPPPKMVQGYKFDIFYPDLLVESKVPDYSIEKDGDSSTTCIIRFHAGPPYEDIAFRIVNGERDYRQRKGFKCEFESGIFHLHFTFKRFPYRR*

Click here to download the sequence:
Link to NCBI Protein BLAST