Transcript Information: S_Transcript_156872.p1


Annotated TAIR IDAT1G03910.2
Annotated Gene NameEXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein, cactus-binding domain, C-terminal (InterPro:IPR019134), Cactin, central region (InterPro:IPR018816); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36815.2).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:996432-1000231 | Forward length=716
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16427778540235
Replicate 20.13619005899701
Replicate 30
Condition 2: 8 Hour
Replicate 10.65819105917077
Replicate 20.55239132443769
Replicate 30.65789653101794
Condition 3: 24 Hour
Replicate 11.0787596785479
Replicate 20.55960028583574
Replicate 30.62276652852139


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_156872.p1 GENE.S_Transcript_156872~~S_Transcript_156872.p1 ORF type:5prime_partial len:162 (+),score=33.24,Cactin_mid|PF10312.5|1.8e-09 S_Transcript_156872:1-486(+)
TTGAAGAGGAGAACTGGAGAAGAGATGGGCTTCGTATGGTGGAAAAAAATAGAGAGGGATTTGGCGGAAGGTGTACCGTTGAAGGAGGTGGTCAAGGCGGCGGCAAGGAGGAAGAGAGCGGCGGTAGAGGTGGTGAAGGAGAAGAAGAAGCATAGGTCGGCGGCAAACAGAGAAGGAGAACGAATTAGGACTCATCAGCATGATGATCAAGATGATGAGATCAAGTTTTGTGTTGATCAGATTGCAATTAGGTCCAAGATTCGCCTGACTCAAGGCAGACCCAAACCCATCGATTTGCTTTTCTTTTATCACCACCTTCACATTCAAGATCATGATGCTCAGAATCATTCACATTGGAATCTCTTCGATTTCGATTTTGATTGTACTCAACTGCCTTACCAGGTTTTCAAGGGTGTCTTTCCCGAGCCCTATAGTAGCAAAATATTGGGATGCGCTCTTGGTGCTTTGCAAGTCTCAATTAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_156872.p1 GENE.S_Transcript_156872~~S_Transcript_156872.p1 ORF type:5prime_partial len:162 (+),score=33.24,Cactin_mid|PF10312.5|1.8e-09 S_Transcript_156872:1-486(+)
LKRRTGEEMGFVWWKKIERDLAEGVPLKEVVKAAARRKRAAVEVVKEKKKHRSAANREGERIRTHQHDDQDDEIKFCVDQIAIRSKIRLTQGRPKPIDLLFFYHHLHIQDHDAQNHSHWNLFDFDFDCTQLPYQVFKGVFPEPYSSKILGCALGALQVSIK*

Click here to download the sequence:
Link to NCBI Protein BLAST