Transcript Information: S_Transcript_157199.p2


Annotated TAIR IDAT1G10640.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3515478-3517807 | Reverse length=532
E-Value4.2E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.99178886590735
Replicate 20.82221575990738
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.26479313795008
Condition 3: 24 Hour
Replicate 10.54273002461104
Replicate 20.14076901600216
Replicate 31.0966106263094


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_157199.p2 GENE.S_Transcript_157199~~S_Transcript_157199.p2 ORF type:complete len:161 (-),score=4.22,Glyco_hydro_28|PF00295.13|5.6e-22 S_Transcript_157199:1118-1600(-)
ATGATTGCTTTGGCATTATTAGAATCTTCTTTGCAGCAGCGCACTTTTATCTCAGCAAATTCATTTACACTCCTATATTTGATCCTCCAGGGTGGCTCAGGCTCTGTGCAAGGTATAACGTTTTCAAATATTCAAGTCAGTCAAGTTCAGCTTCCTATCGTAATAGACCAGTATTATTGCGATAAAAGAACGTGCAAGAATCAAACAACAGCTGTCTCAGTATCAGATATCACATATCAAAATATAAAAGGTTCATACACAGTGAAACCAGTACACCTGGCCTGTAGTGATAACCTTCCATGCACAGACATAACCTTAAACCGCATTCAACTACAGCCACAGCAAGGACCATATCGGATATCAGAACCCTATTGCTGGCAAAGTTTTGGAGAGCTTACGACTCCTATTGTCCCTCCTATTGGTTGTTTTCAGATAGGAAAGCCATTGAAGAACAAGGTTCAGTCGGATGCTGATTTATGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_157199.p2 GENE.S_Transcript_157199~~S_Transcript_157199.p2 ORF type:complete len:161 (-),score=4.22,Glyco_hydro_28|PF00295.13|5.6e-22 S_Transcript_157199:1118-1600(-)
MIALALLESSLQQRTFISANSFTLLYLILQGGSGSVQGITFSNIQVSQVQLPIVIDQYYCDKRTCKNQTTAVSVSDITYQNIKGSYTVKPVHLACSDNLPCTDITLNRIQLQPQQGPYRISEPYCWQSFGELTTPIVPPIGCFQIGKPLKNKVQSDADLC*

Click here to download the sequence:
Link to NCBI Protein BLAST