Transcript Information: S_Transcript_157323.p1


Annotated TAIR IDAT1G65700.3
Annotated Gene NameSmall nuclear ribonucleoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:24434463-24435870 | Reverse length=141
E-Value5.1E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.75366597722
Replicate 229.462731396681
Replicate 334.021693272232
Condition 2: 8 Hour
Replicate 130.199931629232
Replicate 235.989495637821
Replicate 333.62872851966
Condition 3: 24 Hour
Replicate 132.292436464357
Replicate 235.473792032544
Replicate 328.981852266748


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_157323.p1 GENE.S_Transcript_157323~~S_Transcript_157323.p1 ORF type:5prime_partial len:161 (+),score=29.31,LSM|PF01423.18|1.3e-16 S_Transcript_157323:3-485(+)
CTGAAAAAAAAAAAAAGAGAACCCCAAAGCACTCTCTCTCGGCCCTTCCTCTCATTCCGGATACCGTGGCAGTGCCACAGACGGCAGCTTGAGCTTCCCCCCCTCTCTTCATCCTTAATCAACATTCTAGCACAACCAGTGATTGCAAAAACTGTTGAGTTGATTATTCATCTTGGAGGTTGCAGAATGTCTACTGGACCTGGACTTGAGCCTCTAGTGGATCAAATGATTTCAGTTATTACCAATGATGGACGCAACATAATGGGAATCCTGAAAGGTTTTGATCAAGCAACAAATATAATTCTTGATGAATCACATGAGAGGGTTTTTTCCACCAAGGAAGGTGTCCAGCAAATTGTATTGGGTTTGTACATCATCAGGGGTGATAACATAAGCATTATTGGCGAGCTAGATGAAGAGCTGGATGCGCAGATTGAGTTATCAGAGCTAAGGGGCCATCCTTTGAAGCCTGTTATCCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_157323.p1 GENE.S_Transcript_157323~~S_Transcript_157323.p1 ORF type:5prime_partial len:161 (+),score=29.31,LSM|PF01423.18|1.3e-16 S_Transcript_157323:3-485(+)
LKKKKREPQSTLSRPFLSFRIPWQCHRRQLELPPLSSSLINILAQPVIAKTVELIIHLGGCRMSTGPGLEPLVDQMISVITNDGRNIMGILKGFDQATNIILDESHERVFSTKEGVQQIVLGLYIIRGDNISIIGELDEELDAQIELSELRGHPLKPVIH*

Click here to download the sequence:
Link to NCBI Protein BLAST