Transcript Information: S_Transcript_157416.p1


Annotated TAIR IDAT3G46210.1
Annotated Gene NameRibosomal protein S5 domain 2-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:16976960-16978489 | Reverse length=239
E-Value8.6E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.857928796898
Replicate 25.7783496460158
Replicate 34.9766113241462
Condition 2: 8 Hour
Replicate 14.4004773670274
Replicate 24.4388588570886
Replicate 32.7067742990453
Condition 3: 24 Hour
Replicate 15.0277906446606
Replicate 24.6766595316272
Replicate 33.2027992895386


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_157416.p1 GENE.S_Transcript_157416~~S_Transcript_157416.p1 ORF type:5prime_partial len:126 (-),score=20.50 S_Transcript_157416:36-413(-)
GGGGGGGGTTTCTATTTATCTATTTTCTTTATCTTTACTGGTTTGGTTCTTGGTTTGTCAGTTGCAATATGTTGTTGTTTGACTGAAACGGGATATGTTATACTGGATCCAACAAAGCAAGAAGAGCAGAAAATGAAGGCATTCGTATATTTGGTGTTTCCAAATTCAGTTCTATCAGTCCTGCGTCAAGGTTCTTCATGTATAGATGGTGAGCCTATGGAGAATGGGATCATAACATCTGTTACTCATGGGGCAATGTCAGTGGAAGATTATTTTCACTGTTTAGAAAGAGGGCAAGCTGCAACATCAAAGCTGTCTGATTTTCTGAGAAGAAGCTTACAAACTCGGCTTCCTAGCGATTTGCTCGGGCAGACCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_157416.p1 GENE.S_Transcript_157416~~S_Transcript_157416.p1 ORF type:5prime_partial len:126 (-),score=20.50 S_Transcript_157416:36-413(-)
GGGFYLSIFFIFTGLVLGLSVAICCCLTETGYVILDPTKQEEQKMKAFVYLVFPNSVLSVLRQGSSCIDGEPMENGIITSVTHGAMSVEDYFHCLERGQAATSKLSDFLRRSLQTRLPSDLLGQT*

Click here to download the sequence:
Link to NCBI Protein BLAST