Transcript Information: S_Transcript_157417.p1


Annotated TAIR IDAT3G46210.1
Annotated Gene NameRibosomal protein S5 domain 2-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:16976960-16978489 | Reverse length=239
E-Value1.5E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1844341564749
Replicate 24.3015501653016
Replicate 33.5957535760479
Condition 2: 8 Hour
Replicate 14.4260244054427
Replicate 24.0804000663652
Replicate 37.3734064042388
Condition 3: 24 Hour
Replicate 17.2816278301981
Replicate 23.5634923862181
Replicate 33.9657302523767


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_157417.p1 GENE.S_Transcript_157417~~S_Transcript_157417.p1 ORF type:complete len:159 (-),score=34.32,RNase_PH|PF01138.17|5.5e-09,RNase_PH|PF01138.17|5.3e+03 S_Transcript_157417:36-512(-)
ATGATACTGAAGAGAACATTACAGAGCATCTGTATTTTGACTATCAATCCCAACACAACCACCTCAATAATAGTGCAGGTTGTCAACGATGATGGTGCTCTTCTTCCTTGTGCTATTAATGCAGCCTGTGCTGCATTGATTGATGCTGGAATTCCTCTGAAGCATCTTGCTGTTGCAATATGTTGTTGTTTGACTGAAACGGGATATGTTATACTGGATCCAACAAAGCAAGAAGAGCAGAAAATGAAGGCATTCGTATATTTGGTGTTTCCAAATTCAGTCCAGCGTCAAGGTTCTTCATGCATAGGTGAACCTATGGAGAATGGGATCATCACATCTCTTACTCATGGAGCAATGTCAGTGGAAGATTATTTTCACTGTTTAGAAAGAGGGCAAGCTGCAACATCAAAGCTGTCTGATTTTCTGAGAAGAAGCTTACAAACTCGGCTTCCTAGCGATTTGCTCGGGCAGACCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_157417.p1 GENE.S_Transcript_157417~~S_Transcript_157417.p1 ORF type:complete len:159 (-),score=34.32,RNase_PH|PF01138.17|5.5e-09,RNase_PH|PF01138.17|5.3e+03 S_Transcript_157417:36-512(-)
MILKRTLQSICILTINPNTTTSIIVQVVNDDGALLPCAINAACAALIDAGIPLKHLAVAICCCLTETGYVILDPTKQEEQKMKAFVYLVFPNSVQRQGSSCIGEPMENGIITSLTHGAMSVEDYFHCLERGQAATSKLSDFLRRSLQTRLPSDLLGQT*

Click here to download the sequence:
Link to NCBI Protein BLAST