Transcript Information: S_Transcript_157685.p1


Annotated TAIR IDAT5G62410.1
Annotated Gene Namestructural maintenance of chromosomes 2
Annotated Gene Symbol(s)SMC2, TTN3, ATCAP-E1, ATSMC4
Annotation TypeOrtholog
Chromosome Positionchr5:25056308-25062436 | Forward length=1175
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8366823884732
Replicate 22.7974796564896
Replicate 32.6658561879084
Condition 2: 8 Hour
Replicate 13.5872803661111
Replicate 24.0469785366877
Replicate 35.6938358775774
Condition 3: 24 Hour
Replicate 11.1633369906234
Replicate 23.161055714368
Replicate 32.9635369165775


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_157685.p1 GENE.S_Transcript_157685~~S_Transcript_157685.p1 ORF type:complete len:1183 (+),score=338.90,SMC_N|PF02463.15|1e-31,SMC_N|PF02463.15|1.1e-29,SMC_hinge|PF06470.9|2.4e-23,SMC_hinge|PF06470.9|4.4e+03,AAA_21|PF13304.2|1.8e-05,AAA_21|PF13304.2|4.8e+03,AAA_21|PF13304.2|6.1e-07 S_Transcript_157685:245-3793(+)
ATGCACATCAAAGAGATCTGCTTAGAAGGCTTCAAGTCCTACGCTACAAGGACCGTAGTCCCCGGTTTCGACCCGTTTTTCAATGCCATTACTGGCCTAAACGGGTCCGGCAAATCCAACATTTTAGATTCCATTTGCTTCGTTTTGGGTATTACCAACTTGCAGCAGGTTAGGGCTTCCAATCTTCAAGAACTGGTGTATAAGCAAGGCCAAGCTGGCATTACCAAAGCCACTGTTTCCATCATTTTCGATAATTCTGATCGTACTCGAAGCCCCCTTGGTTATGAAGATTGTCCTGAGATTACTGTTAGTCGTCAGATTGTGGTTGGTGGAAGGAATAAGTATCTGATTAACGGACACCTTGCGCAACCTAACCGAGTTCAGAATCTCTTCCACTCTGTCCAGCTGAATGTGAATAACCCACATTTTCTCATAATGCAAGGTCGCATCACAAAAGTTTTAAACATGAAGCCTCCTGAAATATTGTCTATGCTTGAAGAGGCTGCTGGAACGAGAATGTATGAGACGAAGAAAGAAGGTGCATTAAAGACGCTTGAGAAGAAGCAGAGTAAGGTTGATGAGATTGATAAGCTTCTTGATCAGGAGATCCTGCCTGCTTTACAGAAGTTAAGGAAAGAACGAATGCAATACATGCAATGGGCTAATGGAAATGCTGAGCTTGATCGACTTAAAAGGTTCTGCATTGCTTATGAGTATGTTCAAGCTGAGAGGATCAAAGATAGTGCAGTTCGTGAGGTAGAGCAAGTGAAGGCTAAAATTGTTGAGCTTGACACTGATGCACATAAAATGAAGGCGGAACTTCAAGAAATGGATGCCAGAGTATCTGAATTGACCGCTGAGAAGGAAGCAAGTATGAGTGGGGAAATTAAAACGTTGCAACAGAAAGTAGATGCTTTAGCTCATGATCTTGTGAAAGAGACATCTGTGCTGAAAAATAAAGAGGATACTTTCAGAAGTGAAAAAAAGAATGCCGATAAGATTGTAAGAAACATTGAAGAACTGAAGCAGTCAGTAGATGAGAGGGCTGCTGCTGTCAAGAAGGCTGAAGAGGGTGCAGCTGATCTTACAAAGAGAGCTCAGGAACTCTCAAAGGATTTAGATGATTGTGAAAAAGAATATCAGGGTGTGCTGGCGGGAAAGAGCAGTCAGAATGAAGAGAAATGTCTTGAGGATCAGCTAGCTGATGCTAAAGTAGAAGCAGGGAATGCAGAAATAGAGCTAAAGCAACTCATAACACAAATAAACCATGGCGAGAAGGAGTTGAAAGAGAAAACTGCTCAGTTCATGTCAAAGCGTGACGAAGCCACCGCTGTAGAAAATGAACTCAATACTAGGAAAAAGGAAGTTGACAGTGTCAAAAAGGCATTGGACTCCCTTTCGTATAAAGAAGACCAGAATTGCCGCATGGAAGCTCTTAATAAGGAGCGTGCAGCTGAACTGGAGATCGTGCAGAAACTCAAAGATAAATTAAGGGTGCTTTCAGCACAGTTGGCAAATGTTCAGTTCACCTACCGGGATCCAACCAGGAACTTTGATAGATCAACAGTAAAAGGTGTTGTTGCAAAGCTCATCAAAGTAAAAGATGAATCCACAATGATTGCACTGGAGGTTGTGGCTGGTGGTAGGCTCTTCAATGTTGTTGTTGATACAGAAACTACTGGTAAACAGCTTCTGCAAAATGGCAATCTCCGCAGGAGAGTTACTATTATCCCTCTTAACAAAATTCAGGCACATGTTATCTCTCCTGACAAACAGCGAGCTGCTGCTAACATGGTTGGAAAGGAGAATGCAAAACTGGCACTTTCTTTGGTGGAATATGATGAGGAATTGAAGAGTGCTATGGAGTACGTTTTTGGTTCCACCTTTGTTTGCAAGACAAGGGAAGCCGCTGTTAAGGTTGCCTTTAATAAAGAAGGAAACATTGACATTAGGGAGCCATGTGTCACTCTGGAGGGGGACATATTTCAGCCAAGTGGTCTCCTGACTGGTGGCAGTCGCAGGGGCGGGGGTGAATTGCTTGGACAACTTCGGGCTTTGGCAGAGGCTGAGTCAGAGCTTTCTACTCATCAGAAGAGACTATCTGAAATAGAAACTGAGATCGCTCAACTTCTTCCTCTTCAAAAAAAGTTTACTGAACTTAACAACCAGTTGAAGCTGAAGGAGTATGAGCTTGAATTATTCCAGAGCCGTGCTGAGCAAAATGAGCATCACAAGCTTGGAGAATCATTGAAGAAGATTGAGCAGGATCTTGGAGATGCAAGGTCTGCTTTAAAGGAGAAGCAATCAGTTCATGACAACTGTGTTAAGAGGGTATCATCTCTTGAGAAATCAATCAAAGAATATGATAATAGTAGGGGTGCCCGGCTCAAAGATTTAGAAAAAAGGATCAAGGGGTTAAAGGCTGAAATGCAGTCAGCATCTAAGGACCTCAAGGGGCATGAAAATCGAAGAGAAAAGCTTATTATGGAAATGGAGGCTGTCGTTGAAGAACGTGCCTCCTTAGAGAGCCAACTTGATTCTTTGCAGACTCAGATTCAAAGTTTGGTCGCTGAGGTTGAGGAACAGAAAGTCAAGGTGGCTTCCATAAAGGAGAACCACGATCATGCTCAGTCAGAGCTTAATGCTGCTCGTTCAAAGATGAAGGAATGTGACTCAGAAATCAGTCGTAACTTAAAAGAGCAGCAAAAACTCCAAAACAAAAGAAGTGAAGCTAGCCTTGAGGGGAAGAAGATGGAAAATGAGGTCAGGAGGATGGAGGAGGAACAGAAAGACTGTTCTTTGAAGGTTGACAGGTTGATAGAGAAGCATCCCTGGATAGCATCTGAAAAGCAGCTCTTTGGAAGAAGTGGAAGTGACTACGATTTTGAATCTCGTGATCCTCGCAGGGCAAGAGAGGAACTGGAGAGACTACAGGCAGAGCAATCAAGCCTAGAAAAGCGAGTTAACAAAAAGGTCATGGCGATGTTTGAGAAAGCTGAAGATGAGTACAATGAGTTGATAAATAAGAAGAACATTATCGAGAATGATAAAGCAAAGATCAAGCAAGTTATTGAAGAGCTTGACGAGAAAAAGAAGGAGACCCTGAAAGTCACATGGGTGAAAGTTAGCAATGACTTTGGGTCCATCTTTTCGACATTATTGCCCGGAACAACTGCAAAATTGGATCCTCCTGAAGGTTGTAGCTTTTTGGATGGCCTTGAGGTTCGTGTTGCATTTGGAGGAGTTTGGAAACAATCGTTGTCAGAACTAAGTGGAGGACAGAGATCTTTGCTGGCACTGTCTTTGATATTGGCGTTACTTCTATTCAAACCTGCTCCCCTCTATATACTTGATGAGGTTGATGCTGCTCTTGATTTGAGCCACACACAAAATATTGGAAGAATGATCAAAACACACTTTCCTCATTCACAGTTCATTGTTGTTTCTCTCAAGGAAGGGATGTTCAACAACGCAAATGTCATATTCCGCACCAAGTTTGTTGATGGAGTCTCTACCGTTCAGAGAACTGTCACAGCAAAACAGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_157685.p1 GENE.S_Transcript_157685~~S_Transcript_157685.p1 ORF type:complete len:1183 (+),score=338.90,SMC_N|PF02463.15|1e-31,SMC_N|PF02463.15|1.1e-29,SMC_hinge|PF06470.9|2.4e-23,SMC_hinge|PF06470.9|4.4e+03,AAA_21|PF13304.2|1.8e-05,AAA_21|PF13304.2|4.8e+03,AAA_21|PF13304.2|6.1e-07 S_Transcript_157685:245-3793(+)
MHIKEICLEGFKSYATRTVVPGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRASNLQELVYKQGQAGITKATVSIIFDNSDRTRSPLGYEDCPEITVSRQIVVGGRNKYLINGHLAQPNRVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEGALKTLEKKQSKVDEIDKLLDQEILPALQKLRKERMQYMQWANGNAELDRLKRFCIAYEYVQAERIKDSAVREVEQVKAKIVELDTDAHKMKAELQEMDARVSELTAEKEASMSGEIKTLQQKVDALAHDLVKETSVLKNKEDTFRSEKKNADKIVRNIEELKQSVDERAAAVKKAEEGAADLTKRAQELSKDLDDCEKEYQGVLAGKSSQNEEKCLEDQLADAKVEAGNAEIELKQLITQINHGEKELKEKTAQFMSKRDEATAVENELNTRKKEVDSVKKALDSLSYKEDQNCRMEALNKERAAELEIVQKLKDKLRVLSAQLANVQFTYRDPTRNFDRSTVKGVVAKLIKVKDESTMIALEVVAGGRLFNVVVDTETTGKQLLQNGNLRRRVTIIPLNKIQAHVISPDKQRAAANMVGKENAKLALSLVEYDEELKSAMEYVFGSTFVCKTREAAVKVAFNKEGNIDIREPCVTLEGDIFQPSGLLTGGSRRGGGELLGQLRALAEAESELSTHQKRLSEIETEIAQLLPLQKKFTELNNQLKLKEYELELFQSRAEQNEHHKLGESLKKIEQDLGDARSALKEKQSVHDNCVKRVSSLEKSIKEYDNSRGARLKDLEKRIKGLKAEMQSASKDLKGHENRREKLIMEMEAVVEERASLESQLDSLQTQIQSLVAEVEEQKVKVASIKENHDHAQSELNAARSKMKECDSEISRNLKEQQKLQNKRSEASLEGKKMENEVRRMEEEQKDCSLKVDRLIEKHPWIASEKQLFGRSGSDYDFESRDPRRAREELERLQAEQSSLEKRVNKKVMAMFEKAEDEYNELINKKNIIENDKAKIKQVIEELDEKKKETLKVTWVKVSNDFGSIFSTLLPGTTAKLDPPEGCSFLDGLEVRVAFGGVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKTHFPHSQFIVVSLKEGMFNNANVIFRTKFVDGVSTVQRTVTAKQK*

Click here to download the sequence:
Link to NCBI Protein BLAST