Transcript Information: S_Transcript_157691.p1


Annotated TAIR IDAT5G62410.1
Annotated Gene Namestructural maintenance of chromosomes 2
Annotated Gene Symbol(s)SMC2, TTN3, ATCAP-E1, ATSMC4
Annotation TypeOrtholog
Chromosome Positionchr5:25056308-25062436 | Forward length=1175
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14385406073071
Replicate 20.7453645120782
Replicate 30.14953569797514
Condition 2: 8 Hour
Replicate 10.40345333032414
Replicate 20.81627015307111
Replicate 30.14402599733096
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.34083843790697


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_157691.p1 GENE.S_Transcript_157691~~S_Transcript_157691.p1 ORF type:3prime_partial len:740 (+),score=212.91,SMC_N|PF02463.15|3e-31,SMC_hinge|PF06470.9|8.5e+03,SMC_hinge|PF06470.9|1.5e-16,AAA_23|PF13476.2|0.16,AAA_23|PF13476.2|0.81,AAA_21|PF13304.2|9.2e-06 S_Transcript_157691:242-2458(+)
ATGCACATCAAAGAGATCTGCTTAGAAGGCTTCAAGTCCTACGCTACAAGGACCGTAGTCCCCGGTTTCGACCCGTTTTTCAATGCCATTACTGGCCTAAACGGGTCCGGCAAATCCAACATTTTAGATTCCATTTGCTTCGTTTTGGGTATTACCAACTTGCAGCAGGTTAGGGCTTCCAATCTTCAAGAACTGGTGTATAAGCAAGGCCAAGCTGGCATTACCAAAGCCACTGTTTCCATCATTTTCGATAATTCTGATCGTACTCGAAGCCCCCTTGGTTATGAAGATTGTCCTGAGATTACTGTTAGTCGTCAGATTGTGGTTGGTGGAAGGAATAAGTATCTGATTAACGGACACCTTGCGCAACCTAACCGAGTTCAGAATCTCTTCCACTCTGTCCAGCTGAATGTGAATAACCCACATTTTCTCATAATGCAAGGTCGCATCACAAAAGTTTTAAACATGAAGCCTCCTGAAATATTGTCTATGCTTGAAGAGGCTGCTGGAACGAGAATGTATGAGACGAAGAAAGAAGGTGCATTAAAGACGCTTGAGAAGAAGCAGAGTAAGGTTGATGAGATTGATAAGCTTCTTGATCAGGAGATCCTGCCTGCTTTACAGAAGTTAAGGAAAGAACGAATGCAATACATGCAATGGGCTAATGGAAATGCTGAGCTTGATCGACTTAAAAGGTTCTGCATTGCTTATGAGTATGTTCAAGCTGAGAGGATCAAAGATAGTGCAGTTCGTGAGGTAGAGCAAGTGAAGGCTAAAATTGTTGAGCTTGACACTGATGCACATAAAATGAAGGCGGAACTTCAAGAAATGGATGCCAGAGTATCTGAATTGACCGCTGAGAAGGAAGCAAGTATGAGTGGGGAAATTAAAACGTTGCAACAGAAAGTAGATGCTTTAGCTCATGATCTTGTGAAAGAGACATCTGTGCTGAAAAATAAAGAGGATACTTTCAGAAGTGAAAAAAAGAATGCCGATAAGATTGTAAGAAACATTGAAGAACTGAAGCAGTCAGTAGATGAGAGGGCTGCTGCTGTCAAGAAGGCTGAAGAGGGTGCAGCTGATCTTACAAAGAGAGCTCAGGAACTCTCAAAGGATTTAGATGATTGTGAAAAAGAATATCAGGGTGTGCTGGCGGGAAAGAGCAGTCAGAATGAAGAGAAATGTCTTGAGGATCAGCTAGCTGATGCTAAAGTAGAAGCAGGGAATGCAGAAATAGAGCTAAAGCAACTCATAACACAAATAAACCATGGCGAGAAGGAGTTGAAAGAGAAAACTGCTCAGTTCATGTCAAAGCGTGACGAAGCCACCGCTGTAGAAAATGAACTCAATACTAGGAAAAAGGAAGTTGACAGTGTCAAAAAGGCATTGGACTCCCTTTCGTATAAAGAAGACCAGAATTGCCGCATGGAAGCTCTTAATAAGGAGCGTGCAGCTGAACTGGAGATCGTGCAGAAACTCAAAGATAAATTAAGGGTGCTTTCAGCACAGTTGGCAAATGTTCAGTTCACCTACCGGGATCCAACCAGGAACTTTGATAGATCAACAGTAAAAGGTGTTGTTGCAAAGCTCATCAAAGTAAAAGATGAATCCACAATGATTGCACTGGAGGTTGTGGCTGGTGGTAGGCTCTTCAATGTTGTTGTTGATACAGAAACTACTGGTAAACAGCTTCTGCAAAATGGCAATCTCCGCAGGAGAGTTACTATTATCCCTCTTAACAAAATTCAGGCACATGTTATCTCTCCTGACAAACAGCGAGCTGCTGCTAACATGGTTGGAAAGGAGAATGCAAAACTGGCACTTTCTTTGGTGGAATATGATGAGGAATTGAAGGTTGCCTTTAATAAAGAAGGAAACATTGACATTAGGGAGCCATGTGTCACTCTGGAGGGGGACATATTTCAGCCAAGTGGTCTCCTGACTGGTGGCAGTCGCAGGGGCGGGGGTGAATTGCTTGGACAACTTCGGGCTTTGGCAGAGGCTGAGTCAGAGCTTTCTACTCATCAGAAGAGACTATCTGAAATAGAAACTGAGATCGCTCAACTTCTTCCTCTTCAAAAAAAGTTTACTGAACTTAACAACCAGTTGAAGCTGAAGGAGTATGAGCTTGAATTATTCCAGAGCCGTGCTGAGCAAAATGAGCATCACAAGCTTGGAGAATCATTGAAGAAGATTGAGCAGGATCTTGGAGATGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_157691.p1 GENE.S_Transcript_157691~~S_Transcript_157691.p1 ORF type:3prime_partial len:740 (+),score=212.91,SMC_N|PF02463.15|3e-31,SMC_hinge|PF06470.9|8.5e+03,SMC_hinge|PF06470.9|1.5e-16,AAA_23|PF13476.2|0.16,AAA_23|PF13476.2|0.81,AAA_21|PF13304.2|9.2e-06 S_Transcript_157691:242-2458(+)
MHIKEICLEGFKSYATRTVVPGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRASNLQELVYKQGQAGITKATVSIIFDNSDRTRSPLGYEDCPEITVSRQIVVGGRNKYLINGHLAQPNRVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEGALKTLEKKQSKVDEIDKLLDQEILPALQKLRKERMQYMQWANGNAELDRLKRFCIAYEYVQAERIKDSAVREVEQVKAKIVELDTDAHKMKAELQEMDARVSELTAEKEASMSGEIKTLQQKVDALAHDLVKETSVLKNKEDTFRSEKKNADKIVRNIEELKQSVDERAAAVKKAEEGAADLTKRAQELSKDLDDCEKEYQGVLAGKSSQNEEKCLEDQLADAKVEAGNAEIELKQLITQINHGEKELKEKTAQFMSKRDEATAVENELNTRKKEVDSVKKALDSLSYKEDQNCRMEALNKERAAELEIVQKLKDKLRVLSAQLANVQFTYRDPTRNFDRSTVKGVVAKLIKVKDESTMIALEVVAGGRLFNVVVDTETTGKQLLQNGNLRRRVTIIPLNKIQAHVISPDKQRAAANMVGKENAKLALSLVEYDEELKVAFNKEGNIDIREPCVTLEGDIFQPSGLLTGGSRRGGGELLGQLRALAEAESELSTHQKRLSEIETEIAQLLPLQKKFTELNNQLKLKEYELELFQSRAEQNEHHKLGESLKKIEQDLGDA

Click here to download the sequence:
Link to NCBI Protein BLAST