Transcript Information: S_Transcript_1579.p1


Annotated TAIR IDAT1G10510.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)emb2004
Annotation TypeOrtholog
Chromosome Positionchr1:3461771-3465590 | Forward length=605
E-Value2E-286
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.639563772008
Replicate 223.947550474488
Replicate 324.621207133383
Condition 2: 8 Hour
Replicate 120.682413724657
Replicate 223.196271872681
Replicate 324.207947531285
Condition 3: 24 Hour
Replicate 113.099611875432
Replicate 217.918457393695
Replicate 318.251127609732


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_1579.p1 GENE.S_Transcript_1579~~S_Transcript_1579.p1 ORF type:complete len:597 (+),score=121.47,LRR_6|PF13516.2|6.9e+03,LRR_6|PF13516.2|1.8,LRR_6|PF13516.2|36,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|7.4e+02,LRR_6|PF13516.2|22,LRR_6|PF13516.2|3.6e+02,LRR_6|PF13516.2|2.3e+02,LRR_6|PF13516.2|3.7e+03,LRR_6|PF13516.2|1.8e+02,LRR_6|PF13516.2|1.1e+04,LRR_6|PF13516.2|1.4e+02,LRR_6|PF13516.2|7.6,LRR_6|PF13516.2|1.4e+04,LRR_1|PF00560.29|8.8e+03,LRR_1|PF00560.29|3.6,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|2.4e+03,LRR_1|PF00560.29|54,LRR_1|PF00560.29|8.3e+02,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|8.4e+02,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|4.6e+02,LRR_1|PF00560.29|1.7e+02 S_Transcript_1579:267-2057(+)
ATGGCTTCCACTACTTCAACTCCATCTTCCACCCTTTCTCTCTCCTCCCAACCACTCAAACAAAACCCATTTCTATTCCCGGCCAGTGTTGGGTTTCTTGGGAGGAGGCGATGTTTAAAGTTGAAATACACGGTCGTTAGAGCCACCGCGAGTACTTCCGGTGGTGGTGGGTCGGGTCGTAGTCGGAAAGTGTATAGGACATCTCAAGCCCAAAGCCCAATAATACCCATTGGGCCTGTTAAGGAGTTTGCTTCTGCTGTTGTTCCTCCTGCTATCTTTCTTGGCCTCTCTTTCGTTTTGTGGAAGTTGGTTGGTAAAATCCTTTTGCCAAAGCCGCGGAAGGCTGCTACGACAGAAAATAAACCATCCTCACCAGAGATGAAGTGGTCAATTGCCGCTGGCACAAACTTGTTAAAAAATCTCACTCAGAAGATTGAGAGAGAATCAAAGTTGAAGCTCAATGACTTTGCCAAAGAACTCAGGTCATATTCGGTAGTTGATATGTCAGGTCGTAATTTTGGTGATGAAGGTCTATATTTCCTTGCTGAGAGCTTGGCTTACAACCAGGTTGCAGAAGAAGTTGATTTTTCTGCTAATGGCATCACACCAGCTGGATTGAAAGCCTTTGATGGCATTCTCCAATCAAATATCTTCGTGAAGACGTTGAATCTATCTGGGAATCCTATAGGTGATGAAGGAGCTAAGTGTTTATGTGAGATATTGGTAGATAACACTGGTGTCCAGAGGCTTCAGTTGAACAGCACTGGCTTGGGGGATGAGGGTGCAAAAGCGATTGCAGATATGTTGAAGAAGAATTCCACCCTGCGCATTATTGAGCTTAACAACAACACGATTGACTATTCTGGTTTTACAAGTATTGCTGGTGCGCTACTTGAGAATAACACCATCCAAGCTTTACACCTTACTGGCAACTATGGTGGTGCGCTGGGCGTTTCTGCGTTAGCTAAAGGGCTTGAGGGAAACAAGTCCATAAGGGAGCTTCACTTGCATGGAAATTCCATGGGTAATGAAGGAGCTCGTACTTTGATGTCAGGCTTGTCCTCACGCAAAGGAAAATTGACTCTTCTGGACATTAGCAACAATGAAATTGGCTCCAGAGGTGCCTTCCACATTGCAGAATATATTAAGCATACCAAGAGCCTGTTATGGTTGAATGTTTACATGAATGACATTGGGGATGAGGGAGCAGAAAAGATTGCTGATGCACTTAAGCAAAATCGCTCAATTAGTACCATCGACTTGGGAGGAAATAACATTCATGCTAAAGGAGTCACTTGCATTGCTGAGGTCTTGAAAGATAATGATGTCATTACAACATTGGAGCTTGGTTATAATCCAATGGGACCTGATGGGGCAAAGGCTTTATCTGAAGTTCTCAAGTTTCATGGAAATGTAAAAACACTCAAACTTGGCTGGTGTCAGATTGGACGAAAAGGAGCAGAGTTTATTGCCGATACTATAAAGTATAATACCACAATATCAACACTTGATTTGCGGGCAAATGGGTTGATGGATGATGGTGCAGTTTGCCTAGCTCAGAGTTTGAAAGTTGTTAACGAGGTCCTGACTTCACTTGATTTGGGATTTAATGAAATAAGGGATAATGGGGCATTTGCAATAGCACAAGCACTCAAAGCAAATGAGGATGTCGCTCTCACATACATAAACCTTGCTAGCAACTTCATCACAAAACTTGGGCAGGGTGCTCTTACTGATGCAAAAGACCATGTACTTGAAATGAATGGGAAGGAACTAAACATATTCTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_1579.p1 GENE.S_Transcript_1579~~S_Transcript_1579.p1 ORF type:complete len:597 (+),score=121.47,LRR_6|PF13516.2|6.9e+03,LRR_6|PF13516.2|1.8,LRR_6|PF13516.2|36,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|7.4e+02,LRR_6|PF13516.2|22,LRR_6|PF13516.2|3.6e+02,LRR_6|PF13516.2|2.3e+02,LRR_6|PF13516.2|3.7e+03,LRR_6|PF13516.2|1.8e+02,LRR_6|PF13516.2|1.1e+04,LRR_6|PF13516.2|1.4e+02,LRR_6|PF13516.2|7.6,LRR_6|PF13516.2|1.4e+04,LRR_1|PF00560.29|8.8e+03,LRR_1|PF00560.29|3.6,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|2.4e+03,LRR_1|PF00560.29|54,LRR_1|PF00560.29|8.3e+02,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|8.4e+02,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|4.6e+02,LRR_1|PF00560.29|1.7e+02 S_Transcript_1579:267-2057(+)
MASTTSTPSSTLSLSSQPLKQNPFLFPASVGFLGRRRCLKLKYTVVRATASTSGGGGSGRSRKVYRTSQAQSPIIPIGPVKEFASAVVPPAIFLGLSFVLWKLVGKILLPKPRKAATTENKPSSPEMKWSIAAGTNLLKNLTQKIERESKLKLNDFAKELRSYSVVDMSGRNFGDEGLYFLAESLAYNQVAEEVDFSANGITPAGLKAFDGILQSNIFVKTLNLSGNPIGDEGAKCLCEILVDNTGVQRLQLNSTGLGDEGAKAIADMLKKNSTLRIIELNNNTIDYSGFTSIAGALLENNTIQALHLTGNYGGALGVSALAKGLEGNKSIRELHLHGNSMGNEGARTLMSGLSSRKGKLTLLDISNNEIGSRGAFHIAEYIKHTKSLLWLNVYMNDIGDEGAEKIADALKQNRSISTIDLGGNNIHAKGVTCIAEVLKDNDVITTLELGYNPMGPDGAKALSEVLKFHGNVKTLKLGWCQIGRKGAEFIADTIKYNTTISTLDLRANGLMDDGAVCLAQSLKVVNEVLTSLDLGFNEIRDNGAFAIAQALKANEDVALTYINLASNFITKLGQGALTDAKDHVLEMNGKELNIFF*

Click here to download the sequence:
Link to NCBI Protein BLAST