Transcript Information: S_Transcript_15793.p1


Annotated TAIR IDAT1G74040.1
Annotated Gene Name2-isopropylmalate synthase 1
Annotated Gene Symbol(s)IMS1, MAML-3, IPMS2
Annotation TypeOrtholog
Chromosome Positionchr1:27842258-27845566 | Forward length=631
E-Value4.2E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.1724964422995
Replicate 213.202929184025
Replicate 313.360092281034
Condition 2: 8 Hour
Replicate 111.250402765732
Replicate 210.393221021605
Replicate 313.595146897665
Condition 3: 24 Hour
Replicate 110.320417397131
Replicate 26.6028427427154
Replicate 38.3411485434242


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_15793.p1 GENE.S_Transcript_15793~~S_Transcript_15793.p1 ORF type:5prime_partial len:127 (-),score=32.37,HMGL-like|PF00682.15|8.6e-21 S_Transcript_15793:54-434(-)
CGGGTTTGTGGTGGGTTTGGGTTTGAAGAACATCTTGTAAGGGAAGTGGGCTGTTTGGGGGTTTTGGTGGTGAATGAGAATGGTTATGTGCCTGTAATTTGTGGGCTTTCTAGGTGTAATAAAGGTGACATTGATGCTGCTTGGGAAGCTGTTAAGTATGCTAAGAGGCCTAGGATTCATACCTTTATTGCTACTAGTGAGATTCATATGATGCATAAGTTGAATAAGACTAGAGAGGAAGTTGTTGAGATTGCTAGGAGTATGGTTAAATATGCTAGGAGTTTGGGTTGTGATGATGTTGAGTTTAGCCCTGAGGATGCTGGCAGGTTTGCCTTCTTTCTTTCCTTTTGTTGTTGGGTTTGTTTTAGTTGTTTGTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_15793.p1 GENE.S_Transcript_15793~~S_Transcript_15793.p1 ORF type:5prime_partial len:127 (-),score=32.37,HMGL-like|PF00682.15|8.6e-21 S_Transcript_15793:54-434(-)
RVCGGFGFEEHLVREVGCLGVLVVNENGYVPVICGLSRCNKGDIDAAWEAVKYAKRPRIHTFIATSEIHMMHKLNKTREEVVEIARSMVKYARSLGCDDVEFSPEDAGRFAFFLSFCCWVCFSCLL*

Click here to download the sequence:
Link to NCBI Protein BLAST