Transcript Information: S_Transcript_157942.p1


Annotated TAIR IDAT3G24495.1
Annotated Gene NameMUTS Homolog 7
Annotated Gene Symbol(s)MSH7, MSH6-2, ATMSH7
Annotation TypeOrtholog
Chromosome Positionchr3:8912418-8918086 | Reverse length=1109
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6026077386149
Replicate 21.5701620305531
Replicate 31.3798397434811
Condition 2: 8 Hour
Replicate 12.0235771833776
Replicate 21.9595779830417
Replicate 32.3338519275527
Condition 3: 24 Hour
Replicate 11.0762990040986
Replicate 21.2200409516464
Replicate 31.3577560400564


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_157942.p1 GENE.S_Transcript_157942~~S_Transcript_157942.p1 ORF type:complete len:1096 (+),score=229.04,MutS_V|PF00488.17|7.9e-86,MutS_I|PF01624.16|2.8e-33,MutS_I|PF01624.16|1.2e+04,MutS_III|PF05192.14|7.9e-31,MutS_II|PF05188.13|1.3e-09 S_Transcript_157942:76-3363(+)
ATGCATCGCCAGACTTCAATCCTCTCTTTCCTCAAGAAATCCTCGCCGGAAAACTACAACTCCGGCACCGGCGCCGATAACCACCACAATCCTTCTTCACGTATCGTCAACGGCGCCATTAAACCTAACAACGGTCACTTGAAAGCAGTCGAAATCACCGGAACCGATACTCCACCGGAGAAGGCTCCTCGTCAGGTTCTCTCAAATGATTTAACTCCCATTGACGACAAGAAATCGTCGATTTTCTCCAGTATTATGCACAAATTCGTCAAGGTTGATGGAAATGAGAAGATTTCTCAGAGGAGCCAAGGAAGTGGTTGTTCATCTGTTGTTTGCTCCATGTTTGACAAGTTCAATGACTGCAAAGAACCTCCTAAGAAGTCTGACACAGCTTATAAGGTTCCTGAAATTCCTGGTGTTGCAAAATCTCAATTGCTGGGCCAACATGGTTCACTGGACATTAAGAGTGATGTGAATATTGGTGGGCCGGAAACACCAGTTGGACGACCTTTTGTTCCACGTGTGAAGAGAATTCAGGAAGATGGTACTAAATTTGAGGACACAAGTGATCTTAGCCTAACAAATCCTAGCAAAAGAGTGAAATTTCTCCAGGATTCAAAAACAGCAAACAAGCTTCCTCTTCAAGTTTCAGAGACATCTAGTAAGTTTGAGTGGCTTGATCCTTCTCGAATCAGAGATGGAAATGGCAGGCGCCCTGGTGATCCTCTTTATGATAAAAGGACACTTTATATACCACCTGATACTTTGAAGAAAATGTCAGCATCACAGAAACAGTACTGGAGTGTGAAATGCCAATATATGGATGTGCTGCTCTTCTTTAAAGTGGGAAAGTTTTATGAACTCTATGAGCTAGATGCTGAAATAGGACATAAGGAGCTGGATTGGAAGATAACAAATAGCGGTGTGGGAAAATGTAGACAGGTTGGTATTTCTGAGAGTGGGATTGATGATGCTGTTCAGAAGTTGGTTGCCCGCGGGTATAAAGTTGGACGGATGGAGCAGCTGGAGACATCTGATCAAGCAAAAGCAAGGGGTGCAAATGCTGTTATTCCTCGAAAGCTGGTTAATGTGATCACTCCATCGACAGCAGCTGATGAAAATATTGGCCCTGATGCTGTTCATCTTCTTGCAATAAAGGAGGGCTCTCCTGGGGTTGATAGTGGTTCTAACATATTTGGTTTTGCTTTTGTTGACTGTGCTGCTCTCAAATTTTGGATTGGTTCTGTTAGTGATGATACCTCTTGTGCTTCATTAATGGCTTTGCTGATGCAAGTGTCACCTAAGGAAGTAATTTATGAATGTGGAGGTTTATCTAGAGAAGCTCAGAAAGTGCTTAAAAAGTACTCTTCTACAGGTTCAATGGAAGTGCAAATAACTCCAGTACAGCAAGTTAATGGTCTTCTGGATGCTACAGAAGTGAGAAATATGATCCAGGCTAAGAAATACTTTAAAGGCTCTAACAACCTGTGGGAAATTCTGCTTGATGATGTAGCACATCACAATTTTACTTTATGTGCATTGGGTGACCTTCTTGATCATTTATCCAGATTGATGTTGGATGATATTTTATCAAATGGAGACGTATTACCATATAAAGTTTATAAGGGTTGCCTCAGAATGGATGGACAGACACTTGTCAATTTGGAGGTGTTTCATAATAATGCTGATGGTGGTTCAGCAGGTACACTTTTCAAATATCTTGATAACTGCGTAACTCATTCGGGAAAGCGGCTTCTAAGGAATTGGATTTGTCATCCATCAAAAGATGTTGAAAAAATCAATAATAGGCTTAATGTGGTTGAGGCTTTGATGACGCACACTGATATCATGTTAATCATGGTACAATATCTTCGCAAGGTTCCGGATTTAGAGAGGCTTCTTGGCAGGGTTAAGGCTACAGTTAACTCACAAGCTATGCTCCTATTGCCCTTGGTAGGAAAGAAAGCATTCAAACAAAGGGTAAAAGTGTTTGGGACTCTTGTTAAAGGTTTGCGAGTAGGGATGGACTTGTTGATGTTACTACAGAATGAACAACATGTTGCCTCATTATTATCCAAAGTTCTAGACTTTCCAGAGTTTAGTGGGCCTGATGGGCTTAATGAGTTTCTTATCCAATTTGAAGCAGCTATTGATAGTGACTTTCCAAAGTATCAGGATCATGATGCAACAGAACCTGATGCTGAGACGCTATCTATTTTGATGGAGTTATTTCTTGAGAAAGCTAACCAATGGTCTCAAGTGATATCTGCCATCAATTGCATAGATGTGTTAAGATCTTTTGCTGCCATCGCAATTGATTCAAGTGGGTCTATGGCTCGGCCTCTTATTTTACCGCAAACCATTTCTGGCACAATGTGCCAAAATAAAAAAGGACCTGTACTTAAGATCAAAGGTCTGTGGCATCCATTTGCCCTAGGAGAACATGGGGTTCCTGTGCCAAATGATATTGCTCTGGGTGAGCATACAGATGACCTTCATCCTCGGACTTTGCTATTGACTGGTCCAAATATGGGTGGCAAATCAACTCTCCTACGTGCTGCATGTCTAGCTGTTATAATGGCTCAGCTTGGCTGCTACGTGCCATGTGAGGTGTGCGTTCTGTCTGTTTCAGACATCATCTTTACTAGGCTTGGTGCAACTGATCGGATCATGACTGGTGAAAGCACTTTTTACATCGAATGTGCAGAAACAGCATCAGTTCTCCAGAATGCAACACAGGATTCTCTTGTTCTTCTTGATGAATTGGGTCGAGGAACAAGCACTTTTGATGGATATGCCATAGCATATGCGGTGTTCCGCCATCTGATTGAAAAGGTGAACTGTCGTTTACTTTTCGCCACTCACTACCACCCACTTACAAAGGAATTTGCTTCCCATCCTTGTGTTTCTCTGCGGCATATGGCCTTTGCTGTGAAGCCAAGGTCCACGATGGGAAGTGAGAACGAATTGGTATTTCTCTATCGGCTTGCTTCTGGTGCATGTCCTGAAAGCTATGGTTTACAAGTGGCTCTTATGGCCGGAATACCTCAACAAATGGTTGAAGATGCTTCAAGTGCTGGTCGAGCAATGAAAGAAATGATAGGGGAAAGCTTCAAGTCGAGTGAGCAACGATCAGAGTTCTCAACCCTTCATGAACAGTGGCTAAAGACCATAATTTCCCTCTCAAGTTGCGAAGAGAACATTTATGATGACGACATATTTGATACCCTCTTTTGCTTATGGCATGAGCTAAAGAGCTCATATGTGAAATCTCTGGGTTGTGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_157942.p1 GENE.S_Transcript_157942~~S_Transcript_157942.p1 ORF type:complete len:1096 (+),score=229.04,MutS_V|PF00488.17|7.9e-86,MutS_I|PF01624.16|2.8e-33,MutS_I|PF01624.16|1.2e+04,MutS_III|PF05192.14|7.9e-31,MutS_II|PF05188.13|1.3e-09 S_Transcript_157942:76-3363(+)
MHRQTSILSFLKKSSPENYNSGTGADNHHNPSSRIVNGAIKPNNGHLKAVEITGTDTPPEKAPRQVLSNDLTPIDDKKSSIFSSIMHKFVKVDGNEKISQRSQGSGCSSVVCSMFDKFNDCKEPPKKSDTAYKVPEIPGVAKSQLLGQHGSLDIKSDVNIGGPETPVGRPFVPRVKRIQEDGTKFEDTSDLSLTNPSKRVKFLQDSKTANKLPLQVSETSSKFEWLDPSRIRDGNGRRPGDPLYDKRTLYIPPDTLKKMSASQKQYWSVKCQYMDVLLFFKVGKFYELYELDAEIGHKELDWKITNSGVGKCRQVGISESGIDDAVQKLVARGYKVGRMEQLETSDQAKARGANAVIPRKLVNVITPSTAADENIGPDAVHLLAIKEGSPGVDSGSNIFGFAFVDCAALKFWIGSVSDDTSCASLMALLMQVSPKEVIYECGGLSREAQKVLKKYSSTGSMEVQITPVQQVNGLLDATEVRNMIQAKKYFKGSNNLWEILLDDVAHHNFTLCALGDLLDHLSRLMLDDILSNGDVLPYKVYKGCLRMDGQTLVNLEVFHNNADGGSAGTLFKYLDNCVTHSGKRLLRNWICHPSKDVEKINNRLNVVEALMTHTDIMLIMVQYLRKVPDLERLLGRVKATVNSQAMLLLPLVGKKAFKQRVKVFGTLVKGLRVGMDLLMLLQNEQHVASLLSKVLDFPEFSGPDGLNEFLIQFEAAIDSDFPKYQDHDATEPDAETLSILMELFLEKANQWSQVISAINCIDVLRSFAAIAIDSSGSMARPLILPQTISGTMCQNKKGPVLKIKGLWHPFALGEHGVPVPNDIALGEHTDDLHPRTLLLTGPNMGGKSTLLRAACLAVIMAQLGCYVPCEVCVLSVSDIIFTRLGATDRIMTGESTFYIECAETASVLQNATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHPCVSLRHMAFAVKPRSTMGSENELVFLYRLASGACPESYGLQVALMAGIPQQMVEDASSAGRAMKEMIGESFKSSEQRSEFSTLHEQWLKTIISLSSCEENIYDDDIFDTLFCLWHELKSSYVKSLGCV*

Click here to download the sequence:
Link to NCBI Protein BLAST