Transcript Information: S_Transcript_158096.p2


Annotated TAIR IDAT1G75850.1
Annotated Gene NameVPS35 Homolog B
Annotated Gene Symbol(s)VPS35B
Annotation TypeOrtholog
Chromosome Positionchr1:28478053-28483874 | Reverse length=790
E-Value6.5E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3921798863084
Replicate 24.4621372138794
Replicate 33.5227698137215
Condition 2: 8 Hour
Replicate 12.8753335259056
Replicate 24.021905373434
Replicate 31.4370234340437
Condition 3: 24 Hour
Replicate 13.4362738075092
Replicate 22.0371965461885
Replicate 33.6841188456911


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_158096.p2 GENE.S_Transcript_158096~~S_Transcript_158096.p2 ORF type:5prime_partial len:89 (-),score=22.31,Vps35|PF03635.13|1.9e-40 S_Transcript_158096:1197-1463(-)
GTTTACATCAAATCGAAGGAGGTCCCCACAAAGGATATTCTCAAAGATCTTGTTGAAATATGTCGTGCTGTCCAACATCCTGTACGGGGACTTTTCTTGAGGAGCTACCTTTGTCAAGTCACTCGAGACAAACTACCTGATATTGGATCAGAGTATGCAGGGGATGGTGACACTGTGATGGATGCTGTGGACTTTGTGCTGCAAAACTTCACAGAGATGAATAAGCTCTGGGTTCGGTTGCAACAGCAGGTCTTTTGGTGCTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_158096.p2 GENE.S_Transcript_158096~~S_Transcript_158096.p2 ORF type:5prime_partial len:89 (-),score=22.31,Vps35|PF03635.13|1.9e-40 S_Transcript_158096:1197-1463(-)
VYIKSKEVPTKDILKDLVEICRAVQHPVRGLFLRSYLCQVTRDKLPDIGSEYAGDGDTVMDAVDFVLQNFTEMNKLWVRLQQQVFWCL*

Click here to download the sequence:
Link to NCBI Protein BLAST