Transcript Information: S_Transcript_158098.p1


Annotated TAIR IDAT1G75850.1
Annotated Gene NameVPS35 Homolog B
Annotated Gene Symbol(s)VPS35B
Annotation TypeOrtholog
Chromosome Positionchr1:28478053-28483874 | Reverse length=790
E-Value1.3E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7239191083518
Replicate 22.322398900791
Replicate 31.1946711633102
Condition 2: 8 Hour
Replicate 12.6764659912191
Replicate 22.1737828637791
Replicate 32.9341652573659
Condition 3: 24 Hour
Replicate 12.211020596214
Replicate 22.1103954099433
Replicate 31.8380437218303


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_158098.p1 GENE.S_Transcript_158098~~S_Transcript_158098.p1 ORF type:complete len:247 (-),score=39.01,Vps35|PF03635.13|1.9e-66 S_Transcript_158098:358-1098(-)
ATGTACAGAGATACTGTTCTCCCCAGAATCCTAGAACAGGTTATCAACTGTAAAGATGAGCTAGCCCAAAACTATTTGATGGATTGTATCATCCAAGTTTTTCCGGATGAGTACCACTTACAAACGCTTGACATATTATTAGGTGCTTGTCCACAGCTTCAGCCAACAGTTGACGTCAAATTGGTGCTGTCTCAATTGATGGATAGACTTTCAAATTATGCTGCTTCAAGTCCAGAAGTGTTACCAGAATTCCTGCAAGTAGAAGCTTTTGCAAAGCTGAATAATGCCATTGGGAAGGTGATTGAGGGACAGGTTGACATGCCCATTGTTGGAGCCATTACTTTATATACCTCACTTCTTACTTTTGCTCTCCGTGTCCATCCTGATCGGCTTGACTATGTGGATCTGGTGCTGGGTGCATGTGTCAGGAAACTTTCTGGCAAACCAAAGCTTAACGACAGCAGGGCAACAAAACAAATCATTGCACTTTTGAGTGCTCCACTGGAAAAGTATAATGACGCTGTTACGACCTTGACGCTTTCTAATTATCCCCGTGTAATGGACTTTCTTGATAATGATACCAACAAAGTCATGGCCATGGCTATCATACAAAACATTTTAAAGAATGATACTTGCATTTCTACAGCTGATCAGGTATGTTCACTCATTTCATCTTGCTTCTATGCATTGATGTCAATAATGGAAAATCAACCATCCTTTGCAGGTGGAGGCATTGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_158098.p1 GENE.S_Transcript_158098~~S_Transcript_158098.p1 ORF type:complete len:247 (-),score=39.01,Vps35|PF03635.13|1.9e-66 S_Transcript_158098:358-1098(-)
MYRDTVLPRILEQVINCKDELAQNYLMDCIIQVFPDEYHLQTLDILLGACPQLQPTVDVKLVLSQLMDRLSNYAASSPEVLPEFLQVEAFAKLNNAIGKVIEGQVDMPIVGAITLYTSLLTFALRVHPDRLDYVDLVLGACVRKLSGKPKLNDSRATKQIIALLSAPLEKYNDAVTTLTLSNYPRVMDFLDNDTNKVMAMAIIQNILKNDTCISTADQVCSLISSCFYALMSIMENQPSFAGGGIV*

Click here to download the sequence:
Link to NCBI Protein BLAST