Transcript Information: S_Transcript_15814.p2


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5780850588938
Replicate 27.1306935849888
Replicate 37.6721782107778
Condition 2: 8 Hour
Replicate 16.7900042769752
Replicate 29.0561243293613
Replicate 39.2084461653519
Condition 3: 24 Hour
Replicate 110.695254956995
Replicate 213.235665960587
Replicate 311.460896977685


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_15814.p2 GENE.S_Transcript_15814~~S_Transcript_15814.p2 ORF type:complete len:625 (+),score=127.96,UBN2|PF14223.2|3e-35,UBN2|PF14223.2|1.1e+03,UBN2_2|PF14227.2|3.4e-16,UBN2_2|PF14227.2|7e+02,UBN2_2|PF14227.2|2.8e+03,zf-CCHC|PF00098.19|0.00079,zf-CCHC|PF00098.19|0.0032,DUF4219|PF13961.2|1.2e-05 S_Transcript_15814:1820-3694(+)
ATGAGTGCACCCACTAAGAGAGAAGAAGGGCTTTCAAGTACTCGTCCTCCTTACTTCAATGGTAGTCACTATAGTTGGTGGAAGAAGCAAATGGAAATTTACGTGCAAGCTGAAGATTTCCAACTTTGGAACATCACCATGAATGGTCCATTGGCCATTACATACAAGGACGACAAAGGGAAGGAAGTTACTACTCCTCCCTCCTTGTATGATGAGAATGATTTCCGGAAATTGGAAAAGAATGCTAGAGCAATGAAGCTTCTATATTATGCTCTTGGCCCGGATGAGTACAACCGCATTGCAAGTTGTACCACTGCCAAGGAAATCTGGGATATGCTTCAAGTGACCCATGAAGGAACCTCTCAAGTGAAGCAATCACGCATAGAACTTCTCATGAGGGACTATGAGCTTTTCATTATGGCAAAAGATGAATCAATCAAGGAAATGAACACAAGACTCACCAACATAGTGAATGAGCTTAGGTCTCTAGGCAAGAATCTTTCTACCGAAGAACTTGTGAGGAAAATTCTAAGGGTGTTGCCGGGCATTTGGAAACCCAAAGTGACGGCCATAAACGAAGCAAAGGACTTGAGTAAGCTCGCTCTTGAAGACCTAATTGGGAACTTGGAAACGCATGAACTAACTCTCAATTTGCTATCCAAGGCTTCCATGAGTAAAGATAAGAGCATTGCTCTAAAAGTTGCTCAAAGTGATGAAGATTATTCAGACTTTGAAGAAGAGGAAATTGCCATGCTTGCAAGAAGATTTAGAAAGTTCATCAAGCTCAAAAAAGGTTACAACAAGAAAGGTGGCTCAAGCAAAGGAAAGAATGTCCCAAAGAACAATTCTGAAGGATGTTTTAAGTGTGGTAAACATGATCACCGCATCAAAGAATGCCCACTGTGGGAAGAAGAAAATCAGCGGAACCGGGTTCCTGCCTTCCAGAACCAGAAGCACAAAAAGGCTTTCAAACGAGAATTCAAGAAAGCTATGATGGCAGCGGCATGGGGAGACTCGGAAAGTGATGATTCGGATGATCAACCTGATGAAGCAAACTTGTGTCTCATGGCTAAAAGTGACTCGGAATCCGAGGAAGAAAGCCTCCAAGTAAGTATGGAAAACTTTATGAATAAAGCTTATAGATTTAGCAAGAACAAGTTGGTTGAAATGTTGAATATTTTATTTGATAACTACATGAATGTTTCTGGTGAAAGAGACTTGATAAATGAAGCTTTTAGGAGCCTTAGAATGGACTTTAAAGAACTTAGCCATGAGAAGACGTCCCTTGAATGTGTTAATAAAGATTTACTTGCTAAAATGTCTGAAATGGAAGAATCAGGTTCTGTCACTGAGAAAAATTTGCTTGCCTTATCACTAGAACTTGAATCACTTAAGTCCACGAAGGTTAATGAATCACCGCAAGCTAGTAACAGCATTGAATATGCTGGAATTAGTGATTTGGAGCTGATTGAAGTTAAAGTAAAACTTGGAGACCAACTTGAGAAATGTAATGAACTTCAACTTAAGCTTGACCGGACTCTTGGTGAACTTGACAAACTCAAGAAGTGGGAACAATCTTCTAAAGCCCTAACTTGGTTAAATGAACATCACAGTAAATTTAGACAAGGCTTAGGATATAAGAAGCAAAGAACACCTTGGAACCCTAGAAGCAAGTATGTTGACTTACCTTGCAATAGACTTTGTTTTCATTGTGGAAAGAATGGCCACTACCGTAGAGAATGCTTGGCTAGGTTCAAAGCTTATGAGAAGAATGGTTTGCATGTGAAACAAATTTGGGTAGTTAAGAATACACTATTTCATGGCACTAGAGAATCGGGACCCAAACAAGTTTGGGTTCCCAAATCTAACCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_15814.p2 GENE.S_Transcript_15814~~S_Transcript_15814.p2 ORF type:complete len:625 (+),score=127.96,UBN2|PF14223.2|3e-35,UBN2|PF14223.2|1.1e+03,UBN2_2|PF14227.2|3.4e-16,UBN2_2|PF14227.2|7e+02,UBN2_2|PF14227.2|2.8e+03,zf-CCHC|PF00098.19|0.00079,zf-CCHC|PF00098.19|0.0032,DUF4219|PF13961.2|1.2e-05 S_Transcript_15814:1820-3694(+)
MSAPTKREEGLSSTRPPYFNGSHYSWWKKQMEIYVQAEDFQLWNITMNGPLAITYKDDKGKEVTTPPSLYDENDFRKLEKNARAMKLLYYALGPDEYNRIASCTTAKEIWDMLQVTHEGTSQVKQSRIELLMRDYELFIMAKDESIKEMNTRLTNIVNELRSLGKNLSTEELVRKILRVLPGIWKPKVTAINEAKDLSKLALEDLIGNLETHELTLNLLSKASMSKDKSIALKVAQSDEDYSDFEEEEIAMLARRFRKFIKLKKGYNKKGGSSKGKNVPKNNSEGCFKCGKHDHRIKECPLWEEENQRNRVPAFQNQKHKKAFKREFKKAMMAAAWGDSESDDSDDQPDEANLCLMAKSDSESEEESLQVSMENFMNKAYRFSKNKLVEMLNILFDNYMNVSGERDLINEAFRSLRMDFKELSHEKTSLECVNKDLLAKMSEMEESGSVTEKNLLALSLELESLKSTKVNESPQASNSIEYAGISDLELIEVKVKLGDQLEKCNELQLKLDRTLGELDKLKKWEQSSKALTWLNEHHSKFRQGLGYKKQRTPWNPRSKYVDLPCNRLCFHCGKNGHYRRECLARFKAYEKNGLHVKQIWVVKNTLFHGTRESGPKQVWVPKSNP*

Click here to download the sequence:
Link to NCBI Protein BLAST