Transcript Information: S_Transcript_15822.p1


Annotated TAIR IDAT4G31880.1
Annotated Gene NameLOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1); Has 137162 Blast hits to 70781 proteins in 2973 species: Archae - 289; Bacteria - 24182; Metazoa - 56725; Fungi - 20130; Plants - 6559; Viruses - 758; Other Eukaryotes - 28519 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:15419435-15423939 | Reverse length=873
E-Value3.7E-182
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.406240959213
Replicate 227.376469173476
Replicate 326.957917227638
Condition 2: 8 Hour
Replicate 123.834259766207
Replicate 221.602117998404
Replicate 323.374092601245
Condition 3: 24 Hour
Replicate 128.948713526936
Replicate 229.07809787154
Replicate 324.522209654697


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_15822.p1 GENE.S_Transcript_15822~~S_Transcript_15822.p1 ORF type:complete len:901 (+),score=285.98 S_Transcript_15822:409-3111(+)
ATGGAAAAAGAGCTGGAAAAACATCTGTTAGAAGCTGGAAACGCTCTTCTCTCTCCTCCTTCTTCAGTCGATGAACTTCTTACTTTACTCGACCGTATTGAAGCTTATCTCACCAGAGTAGAGCAGTCCCCTTCTGATTCAATGAAGAAAGCGCTTTCTCCGTCAATGAAAGCACTAATTGCAGACGACCTCTTGAAACATTCTAACATTGACGTGAAAGTTTCTGTAGCTGCATGTATCAGTGAGATAACAAGGATTACGGCTCCAGATGCTCCGTACGAGGATGATCAAATGAAGGAGGTGTTTCAATTGATTGTATCGTCTTTTGAGAACCTGGATGACAAATCCAGTCCATCATTCATCAAGAGGACTTGTATCCTTGAGACAGTAGCAAAAGTCAGATCATGTGTGGTGATGCTTGATCTTGAATGTGACGGATTAATTGTTGAAATGTTTCAACACTTCTTTAGATCTATAAGGGATGATCACCCAGAGAGTGTTTTTTCTTCCATGGAGACCATTATGACCCTTGTCTTGGAAGAAAGTGAGGATATATCAATTGATCTGCTTTCATCAATTCTAGATTTTTTAAAAACAGACAACAAGGAAGTCCTCCCAATTGCACGTGAACTGGGGGAGAAAGTGATAGAAAAATGTGCTAGCAAGCTTAAACCATACTTGTTACCAGCTGTGAAGTCTCGGGGTGCTTCTCTAGATGATTATAGCAAGGTTGTTGCAAATGTTTGCCAAACAGGAACTGAAGCTGTTGAGCCTGGTGATGAGGATGCTGCAAGAAAAAATTTGGCTGACGGAAGTGAGTTGGCCAACCCACCTCAAGAAAAGGCAGTTGAGGTAGCTATGGGAACACTAGATGATGCGCCACCTTCTGAGGAAGTGGGTCCAACCACAGTTCCATCCCCAAAGTCTGTTATGAGCAATGGTAGCCTCCAGAAGGAGATTGAGGACACATCGGCAGGTAATGATAATTTGAAGGAGGCCGATCATGATACTCATGATCAGGTTAAAGCTGATTTAGAGCCGGACAAGACTAATGCTGGGAGTTTGGATGCTGAAGAACCAGAAAAGTTGCATTCTAAGCCCGAAAAGTCTAACCGGCGAAAAGGGAGGAAAACAACTGCTTTGAAGAGCTCACCAGAACCTTCTGAGCCTTCCCTTACGGATGATATGAAGGAGTCAGTAAAGGTGTCTGGCCCTCAAGAGAAAGATGGCAGGGATGTTGACAGTGTTGTAAATGAGGATGCTGTGGCTGCTGCTGCAGAACCTTCTGAAAATGAGAAAGAGTCTAACCCTCCAATTTCCTCGCCAAAGACATCAGATAATGAGCCCGACCATGCATCCTCCCCGTCAATGAGTGAAACCCTTGCTGATGAAATTCGTTCTAAGAAGGCTGGGCGAGCAAAAAAGAAAGATGACTTGGTGCAACAAAGTGAGCCAGTAGGTGATGTGGATTCTAAGAAGGAATCTGATACAAAGAAGACACCGGAAGAATCTGGCATTCCAGAGTCCAAATTGCATAAGCGCTCTGGCAAGAAGGCATCTAGTGGACAGTCTGGATTGGATAAGGAAGATAAGATTTCTAGTCTTGTTGATGCATCAAAGAAAGAAGATGAAAATACAAGTGAGCTGGATGCAAAATCGACAAAACAGTCGGGGAAGAAAGCTGAAGTGGTTAGTAACCAACATGACGATAAAAAGAAAAAAGGGCAAGTCAAAGGGACTCCAGCCAAAGGTCTTGCAAAAACTCCACCCAAAGACTCGGGAAAAAAACCTTTGCCTAAGTCAACTGGGAAATCAACGAAAGACGAAAGTGATGTGGAGAAAGCATCTACAAGTTCCAAGAGGAAGCGCAGCCAAAGTGAAGGAAAGGCCACCGGGACTAAAGGTTATGGTGAAGAAATGGTTGGTGAAAGAGTTCGAGTTTGGTGGCCAGATGACAAAAAATACTATAAAGGGGTTGTGAAGTCCTATGATCCTAAAGCAAAGAGGCACACGGTCAATTACGATGATGGTGATGTAGAGTACTTGATACTTGCTAAGGAAAAGTTTGAGATTCTTAAAGATGAAGCCGAGGCTGTTCAGGGAAATACGAGTGATGGTGAAAGTCCTGATAAATCCTCAGAAATGCCGAAGGGAAAGAAAGCAAAGACTAGTTCAGACCTAGTGAAGCGTGGGAAGACTGGAAGCTCTGCAAAGAAAGGGGGAGCATCCTCCAGCAAATCAAAAGCTACACCCAAGTCTGGTAGTAAGCAGAAGGACGACAGTAAAGCAGACGGTAAATCCAAGGAGGGAGCTTCAAAGAAAAGTGGTAAACCCGAAGAGGATAAAGTTGGAAAATCCAAAGATCTGAAAGCTGGAAACAAGTCCTCTGATACACCAAAAGCAGTTGGAAAATCCAAAGGCGATGATGCAGAGGCATCAAAAGGCAGCAGCAAGTCAAAGCTAGAGACTCCCAAAGGTGGCGCAAAGTCTAAGGGTAAATCTCCCAAAGTAGGCAGCAAATCTAACACTAATGGCACCGACAAAGTCAAAGCTACTACATCAAAGGAAGAGGAAGATGACGATGAAGAGATGACGCCTGAACCTGCTAAAGCACCTGAAGCTGCTGCTGCAAAGGGGAAATCTCCAAGTACATTGAAATCGCAGAAGAGTGCGAAGAAGAGAAAACGAGGTTCCAAAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_15822.p1 GENE.S_Transcript_15822~~S_Transcript_15822.p1 ORF type:complete len:901 (+),score=285.98 S_Transcript_15822:409-3111(+)
MEKELEKHLLEAGNALLSPPSSVDELLTLLDRIEAYLTRVEQSPSDSMKKALSPSMKALIADDLLKHSNIDVKVSVAACISEITRITAPDAPYEDDQMKEVFQLIVSSFENLDDKSSPSFIKRTCILETVAKVRSCVVMLDLECDGLIVEMFQHFFRSIRDDHPESVFSSMETIMTLVLEESEDISIDLLSSILDFLKTDNKEVLPIARELGEKVIEKCASKLKPYLLPAVKSRGASLDDYSKVVANVCQTGTEAVEPGDEDAARKNLADGSELANPPQEKAVEVAMGTLDDAPPSEEVGPTTVPSPKSVMSNGSLQKEIEDTSAGNDNLKEADHDTHDQVKADLEPDKTNAGSLDAEEPEKLHSKPEKSNRRKGRKTTALKSSPEPSEPSLTDDMKESVKVSGPQEKDGRDVDSVVNEDAVAAAAEPSENEKESNPPISSPKTSDNEPDHASSPSMSETLADEIRSKKAGRAKKKDDLVQQSEPVGDVDSKKESDTKKTPEESGIPESKLHKRSGKKASSGQSGLDKEDKISSLVDASKKEDENTSELDAKSTKQSGKKAEVVSNQHDDKKKKGQVKGTPAKGLAKTPPKDSGKKPLPKSTGKSTKDESDVEKASTSSKRKRSQSEGKATGTKGYGEEMVGERVRVWWPDDKKYYKGVVKSYDPKAKRHTVNYDDGDVEYLILAKEKFEILKDEAEAVQGNTSDGESPDKSSEMPKGKKAKTSSDLVKRGKTGSSAKKGGASSSKSKATPKSGSKQKDDSKADGKSKEGASKKSGKPEEDKVGKSKDLKAGNKSSDTPKAVGKSKGDDAEASKGSSKSKLETPKGGAKSKGKSPKVGSKSNTNGTDKVKATTSKEEEDDDEEMTPEPAKAPEAAAAKGKSPSTLKSQKSAKKRKRGSKS*

Click here to download the sequence:
Link to NCBI Protein BLAST