Transcript Information: S_Transcript_158540.p1


Annotated TAIR IDAT4G03510.1
Annotated Gene NameRING membrane-anchor 1
Annotated Gene Symbol(s)RMA1, ATRMA1
Annotation TypeHomolog
Chromosome Positionchr4:1557905-1558654 | Reverse length=249
E-Value3E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8331483260548
Replicate 23.3593547885928
Replicate 33.946593729824
Condition 2: 8 Hour
Replicate 19.0391572126119
Replicate 28.377935087305
Replicate 37.0175629975247
Condition 3: 24 Hour
Replicate 15.8432815921342
Replicate 26.1556031441931
Replicate 34.1517768568092


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_158540.p1 GENE.S_Transcript_158540~~S_Transcript_158540.p1 ORF type:complete len:243 (+),score=31.27,zf-C3HC4|PF00097.21|5.7e-09,zf-C3HC4_3|PF13920.2|4.8e-08,zf-C3HC4_3|PF13920.2|1e+04,zf-C3HC4_2|PF13923.2|1.4e-07,zf-C3HC4_2|PF13923.2|5.4e+03,zf-RING_5|PF14634.2|4.5e-07,zf-C3HC4_4|PF15227.2|2.8e-06,zf-RING_2|PF13639.2|1.8e-06,zf-RING_UBOX|PF13445.2|1.1e-05,zf-RING_UBOX|PF13445.2|34 S_Transcript_158540:114-842(+)
ATGGCATTCGAGCATCAGGTCGACAGTAAATGGAAATCTGCAACAGCTGCTGCTCCTGAAGATTCAGAAAATCGTAACAGCAGTTTTGACTGCAACATCTGCTTCGACTTTGCAAGTGACCCTGTAGTCACTCTCTGTGGCCATCTCTACTGCTGGCCTTGCATCTACAAGTGGTTTCATGTGCAGAGTGCCACGCTTCCCTCGGATGAGTATCCACAATGCCCTGTTTGCAAGGCCGAAATATCTCACACGACTGTGATCCCTCTATATGGCCGTGGCCAATCCAGATCCCAGCACGAGTGTGAACCCAAGGCTGCTTTTCCTGATATGGTTATACCTCCAAGGCCACCAGCTTGTGGTACTCGAGCACTGCTCACTGCTGCAGCTCAACCTAACCATCGGCTTCCTCCTTACCATAACCCATATCAACAACAGTATGTTCAACCTTATAGTGGGCCTGAAGAGGCGATCTCCAGCTCGCCATTGTTTAACCAAACAGGCAATGGAATTGCTAATGTCTTCCAGCCAGTCATGGGAATGTTCGGGGACATGGTCTATGCCAGGGTGTTTGGGAACTCACATGGCCTGTATACATATCCGAATTCGTATTATCTTGTAGGAAGTAACAGTACAAGGCTCAGAAGGCAAGAAATGCAGGTTGATAAATCCTTGAGTAGGATTTCTCTTTTCCTTTTATGCTGCTTCCTTCTTTGTCTCCTCCTATTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_158540.p1 GENE.S_Transcript_158540~~S_Transcript_158540.p1 ORF type:complete len:243 (+),score=31.27,zf-C3HC4|PF00097.21|5.7e-09,zf-C3HC4_3|PF13920.2|4.8e-08,zf-C3HC4_3|PF13920.2|1e+04,zf-C3HC4_2|PF13923.2|1.4e-07,zf-C3HC4_2|PF13923.2|5.4e+03,zf-RING_5|PF14634.2|4.5e-07,zf-C3HC4_4|PF15227.2|2.8e-06,zf-RING_2|PF13639.2|1.8e-06,zf-RING_UBOX|PF13445.2|1.1e-05,zf-RING_UBOX|PF13445.2|34 S_Transcript_158540:114-842(+)
MAFEHQVDSKWKSATAAAPEDSENRNSSFDCNICFDFASDPVVTLCGHLYCWPCIYKWFHVQSATLPSDEYPQCPVCKAEISHTTVIPLYGRGQSRSQHECEPKAAFPDMVIPPRPPACGTRALLTAAAQPNHRLPPYHNPYQQQYVQPYSGPEEAISSSPLFNQTGNGIANVFQPVMGMFGDMVYARVFGNSHGLYTYPNSYYLVGSNSTRLRRQEMQVDKSLSRISLFLLCCFLLCLLLF*

Click here to download the sequence:
Link to NCBI Protein BLAST