Transcript Information: S_Transcript_158679.p1


Annotated TAIR IDAT5G60580.2
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24354298-24356706 | Forward length=494
E-Value7.6E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.251250438916
Replicate 225.783592547024
Replicate 320.195015046413
Condition 2: 8 Hour
Replicate 116.158668672602
Replicate 218.014386434364
Replicate 315.898280636494
Condition 3: 24 Hour
Replicate 128.797886786888
Replicate 226.270641447167
Replicate 324.742765651575


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_158679.p1 GENE.S_Transcript_158679~~S_Transcript_158679.p1 ORF type:3prime_partial len:421 (+),score=60.98,RINGv|PF12906.3|3.6e-10 S_Transcript_158679:373-1632(+)
ATGTTTACTGCATTCATAACTCTCGTTCATATCAAAATTTGCTTTGCTTTTCTTTGTTTTTTTTTTCAGGTTGAGAGTTCCTGCAGAGAAACTGAAGGTGCAACAAATTTAACCAACTGGAGAAGACAGGACCTGTTTCTTGATATCCCTTCAAGGAAAGGTCACGTCTGTCAAGATTCTGTAAAAATCAAGAAACCTCCTACACCGATGACCACACCAAAGAGAGCAAATTTTGCTTTGGCTCGCGCTTCTTCTGATGTAGTGAAACTACATGAGTCCCCTGGTCCTTCTGCATCTGTTCGTGGGCGTTCCCCTTTTAAGAACATTCTACCTAAACTCAATTTTATTCATCGAAGCTCTTCAGATGTTCAGAAACTTGCGTACATGGTCAATGACCTTCCGTCTGCAACACCAAAGTCATCTTCACTGACGAAGATCTTCAGTCCGAGAATAGACAGGACATCATCTCTACCAGTTGCTTCATATACAAAGCCAGAATCTGCACACTGTGTGAGCACTGGTGCTTCACCTCATTTTCAAGCTAAGGATGTTCACACCACGCGTGAAGCTAAAGTGCACTTTGCTCGTTCACTTTCAGCTCCCCTCAATAAAGAGATGCGTGCAAAGAGGATGGATTCCTTTATCCGTGTAATTCCCTCACCTCGGGTGAAAGGAGGAAATCTTACAACTCCAAAGACAAAATTTCCAGATGATATTGAGAGCACAGAAGAAGACGATGGTGAAGATATACCTGAAGAGGTTGCTGTGTGTAGAATATGTTTGGTTGAATTATGTGAAGGCAGAGAAACCCTGAATATGGAATGCTCTTGTAAGGGTGACATGGCTCTAGCACACCAAGAATGTGCTTTGAAATGGTTTAGCATCAAAGGGAACAAGTCGTGTGATGTATGTAAACAAGAGCTTCGTAATCTACCAGTCACTCTTCTACGTATCCAGAGTACTCTTGGAGTGGATGCAGGAACTAACAGAGCTCAAAGGCTTCAATTTAGTGATTTCAGCACTTGGCAAGAAGTGCCTGTGCTTGTCATTGTCAGCATGCTCGCGTATTTCTGTTTCTTGGAGCAGCTTCTGGTCGCAAAAATGGGTACAGGAGCAATTGCACTCTCTCTTCCATTTTCTTGCGTATTGGGTCTACTTTCTTCAATGACCTCGTCAACCATGGTCTCGAAAAGATTTCTTTGGATTTATGCGTCTGTGCAGTTCGTTCTGGTTGTCATCTTTGCCCATGTTTTCTATTCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_158679.p1 GENE.S_Transcript_158679~~S_Transcript_158679.p1 ORF type:3prime_partial len:421 (+),score=60.98,RINGv|PF12906.3|3.6e-10 S_Transcript_158679:373-1632(+)
MFTAFITLVHIKICFAFLCFFFQVESSCRETEGATNLTNWRRQDLFLDIPSRKGHVCQDSVKIKKPPTPMTTPKRANFALARASSDVVKLHESPGPSASVRGRSPFKNILPKLNFIHRSSSDVQKLAYMVNDLPSATPKSSSLTKIFSPRIDRTSSLPVASYTKPESAHCVSTGASPHFQAKDVHTTREAKVHFARSLSAPLNKEMRAKRMDSFIRVIPSPRVKGGNLTTPKTKFPDDIESTEEDDGEDIPEEVAVCRICLVELCEGRETLNMECSCKGDMALAHQECALKWFSIKGNKSCDVCKQELRNLPVTLLRIQSTLGVDAGTNRAQRLQFSDFSTWQEVPVLVIVSMLAYFCFLEQLLVAKMGTGAIALSLPFSCVLGLLSSMTSSTMVSKRFLWIYASVQFVLVVIFAHVFYS

Click here to download the sequence:
Link to NCBI Protein BLAST