Transcript Information: S_Transcript_158682.p1


Annotated TAIR IDAT5G60580.2
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24354298-24356706 | Forward length=494
E-Value4E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.811143915869
Replicate 228.016240707955
Replicate 328.835071495788
Condition 2: 8 Hour
Replicate 121.720304952636
Replicate 220.122826818802
Replicate 319.511331405618
Condition 3: 24 Hour
Replicate 135.136743815559
Replicate 228.599571751105
Replicate 328.091218768661


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_158682.p1 GENE.S_Transcript_158682~~S_Transcript_158682.p1 ORF type:complete len:378 (+),score=71.94,RINGv|PF12906.3|5.5e-10 S_Transcript_158682:329-1462(+)
ATGGAAATTGAGGAGAAGAAGTCTTCTGTATGTGAGCTTGCTGTTGCTGATCATCATCAAAAGGTTGAGAGTTCCTGCAGAGAAACTGAAGGTGCAACAAATTTAACCAACTGGAGAAGACAGGACCTGTTTCTTGATATCCCTTCAAGGAAAGGTCACGTCTGTCAAGATTCTGTAAAAATCAAGAAACCTCCTACACCGATGACCACACCAAAGAGAGCAAATTTTGCTTTGGCTCGCGCTTCTTCTGATGTAGTGAAACTACATGAGTCCCCTGGTCCTTCTGCATCTGTTCGTGGGCGTTCCCCTTTTAAGAACATTCTACCTAAACTCAATTTTATTCATCGAAGCTCTTCAGATGTTCAGAAACTTGCGTACATGGTCAATGACCTTCCGTCTGCAACACCAAAGTCATCTTCACTGACGAAGATCTTCAGTCCGAGAATAGACAGGACATCATCTCTACCAGTTGCTTCATATACAAAGCCAGAATCTGCACACTGTGTGAGCACTGGTGCTTCACCTCATTTTCAAGCTAAGGATGTTCACACCACGCGTGAAGCTAAAGTGCACTTTGCTCGTTCACTTTCAGCTCCCCTCAATAAAGAGATGCGTGCAAAGAGGATGGATTCCTTTATCCGTGTAATTCCCTCACCTCGGGTGAAAGGAGGAAATCTTACAACTCCAAAGACAAAATTTCCAGATGATATTGAGAGCACAGAAGAAGACGATGGTGAAGATATACCTGAAGAGGATGCCGTGTGTAGAATATGTTTGATTGAATTATGTGAAGGCAGAGAAACCCTGAATATGGAATGCTCTTGTAAGGGTGACATGGCTCTAGCACACCAAGAATGTGCTTTGAAATGGTTTAGCATCAAAGGGAACAAGTCGTGTGATGTATGTAAACAAGAGCTTCGTAATCTACCAGTCACTCTTCTACGTATCCAGAGTACTCTTGGAGTGGATGCAGGAACTAACAGAGCTCAAAGGCTTCAATTTAGTGATTTCAGCACTTGGCAAGAAGTGCCTGTGCTTGTCATTGTCAGCATGCTCGCGTATTTCTGTTTCTTGGAGCAGCTTCTGGTAAGACATATATCCATTCGTAGGTCCAGATATGTACTTCAGTATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_158682.p1 GENE.S_Transcript_158682~~S_Transcript_158682.p1 ORF type:complete len:378 (+),score=71.94,RINGv|PF12906.3|5.5e-10 S_Transcript_158682:329-1462(+)
MEIEEKKSSVCELAVADHHQKVESSCRETEGATNLTNWRRQDLFLDIPSRKGHVCQDSVKIKKPPTPMTTPKRANFALARASSDVVKLHESPGPSASVRGRSPFKNILPKLNFIHRSSSDVQKLAYMVNDLPSATPKSSSLTKIFSPRIDRTSSLPVASYTKPESAHCVSTGASPHFQAKDVHTTREAKVHFARSLSAPLNKEMRAKRMDSFIRVIPSPRVKGGNLTTPKTKFPDDIESTEEDDGEDIPEEDAVCRICLIELCEGRETLNMECSCKGDMALAHQECALKWFSIKGNKSCDVCKQELRNLPVTLLRIQSTLGVDAGTNRAQRLQFSDFSTWQEVPVLVIVSMLAYFCFLEQLLVRHISIRRSRYVLQY*

Click here to download the sequence:
Link to NCBI Protein BLAST