Transcript Information: S_Transcript_158748.p1


Annotated TAIR IDAT1G06140.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:1864796-1866472 | Forward length=558
E-Value4E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53226002470361
Replicate 20.4412557911503
Replicate 30.55328208250802
Condition 2: 8 Hour
Replicate 10.85301561268532
Replicate 21.3423109183836
Replicate 30.21315847604981
Condition 3: 24 Hour
Replicate 10.65534650471782
Replicate 20.9065524630539
Replicate 30.50444088810232


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_158748.p1 GENE.S_Transcript_158748~~S_Transcript_158748.p1 ORF type:5prime_partial len:100 (-),score=30.36,PPR_2|PF13041.2|0.38,PPR_2|PF13041.2|1.8e-09,PPR|PF01535.16|0.015,PPR|PF01535.16|2.9e-05,PPR|PF01535.16|1.4e+02,PPR_1|PF12854.3|83,PPR_1|PF12854.3|0.00044,PPR_1|PF12854.3|3.9,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|6e+02 S_Transcript_158748:187-486(-)
GAGGATGTCTTTGTTGGGAATGCTTTTATTGACATGTATGCAAATTGTGGGGATTTGAGATTGTCGAAGAGTGTTTTTGATACAATGGATGAAAGAGATGTGGTGTCTTGGACTGCCCTTGTGGTTGCTTACATGACTCATGGTCATATCGAGGAAGCTGTTGATGCATTTCACAGGATGGAGGTGGATGATGTGGTACCTGATTTGATTTCTTGGAGTGCGCTTGTCTCGGCTTTGCTCAGAATGGTGACATTGAAATGGCTTTACAATCTCTGGAGGAGATGCAGGAAAAAGGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_158748.p1 GENE.S_Transcript_158748~~S_Transcript_158748.p1 ORF type:5prime_partial len:100 (-),score=30.36,PPR_2|PF13041.2|0.38,PPR_2|PF13041.2|1.8e-09,PPR|PF01535.16|0.015,PPR|PF01535.16|2.9e-05,PPR|PF01535.16|1.4e+02,PPR_1|PF12854.3|83,PPR_1|PF12854.3|0.00044,PPR_1|PF12854.3|3.9,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|6e+02 S_Transcript_158748:187-486(-)
EDVFVGNAFIDMYANCGDLRLSKSVFDTMDERDVVSWTALVVAYMTHGHIEEAVDAFHRMEVDDVVPDLISWSALVSALLRMVTLKWLYNLWRRCRKKE*

Click here to download the sequence:
Link to NCBI Protein BLAST