Transcript Information: S_Transcript_15895.p1


Annotated TAIR IDAT3G55530.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)SDIR1
Annotation TypeHomolog
Chromosome Positionchr3:20595300-20597188 | Reverse length=273
E-Value5E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4516182491917
Replicate 20.20057081415923
Replicate 30
Condition 2: 8 Hour
Replicate 10.19386718470121
Replicate 21.4236630952553
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 21.2362079041644
Replicate 30.22929131277378


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_15895.p1 GENE.S_Transcript_15895~~S_Transcript_15895.p1 ORF type:complete len:110 (+),score=16.61,zf-RING_2|PF13639.2|4.2e-12,zf-RING_11|PF17123.1|3.9e-09,zf-RING_11|PF17123.1|2e+03,zf-C3HC4|PF00097.21|7.9e-08,zf-rbx1|PF12678.3|8.5e-07,zf-C3HC4_2|PF13923.2|1.6e-06,zf-RING_5|PF14634.2|5.5e-06,zf-C3HC4_3|PF13920.2|1.1e-05 S_Transcript_15895:164-493(+)
ATGCTCTACCAGTGCACAAGTATAAGTGATGCAGGAGCAGTACAGCAGGCATCATCGTCATCAACGTCTCCTCAGAAGCAGCATGATATTTCCATCAACTTAGGAAGTTCTAAGGGGACCTCCGAAGATGAACTAACTTGTAGTGTTTGCTTGGAGCAAGTAGCTGTGGGCGAACTCATTCGTAGCTTGCCATGTTTACACCAGTACCATGCTAACTGCATTGATCCGTGGCTGAGACAGCAGGGAACATGCCCTGTGTGTAAATTCAAGGTCGGAGCTGGCTGGCATGAAGACGGTCAGGGTGGAGTTGATGCTTCGTTCATTGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_15895.p1 GENE.S_Transcript_15895~~S_Transcript_15895.p1 ORF type:complete len:110 (+),score=16.61,zf-RING_2|PF13639.2|4.2e-12,zf-RING_11|PF17123.1|3.9e-09,zf-RING_11|PF17123.1|2e+03,zf-C3HC4|PF00097.21|7.9e-08,zf-rbx1|PF12678.3|8.5e-07,zf-C3HC4_2|PF13923.2|1.6e-06,zf-RING_5|PF14634.2|5.5e-06,zf-C3HC4_3|PF13920.2|1.1e-05 S_Transcript_15895:164-493(+)
MLYQCTSISDAGAVQQASSSSTSPQKQHDISINLGSSKGTSEDELTCSVCLEQVAVGELIRSLPCLHQYHANCIDPWLRQQGTCPVCKFKVGAGWHEDGQGGVDASFIV*

Click here to download the sequence:
Link to NCBI Protein BLAST