Transcript Information: S_Transcript_15901.p1


Annotated TAIR IDAT3G55530.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)SDIR1
Annotation TypeHomolog
Chromosome Positionchr3:20595300-20597188 | Reverse length=273
E-Value4E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35963515182676
Replicate 20.59629160966256
Replicate 31.7445831430433
Condition 2: 8 Hour
Replicate 10.57636190046305
Replicate 20.60464455783045
Replicate 31.4402599733096
Condition 3: 24 Hour
Replicate 10.59040225650254
Replicate 21.0719370340164
Replicate 31.1929345326744


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_15901.p1 GENE.S_Transcript_15901~~S_Transcript_15901.p1 ORF type:5prime_partial len:148 (+),score=26.34,zf-RING_2|PF13639.2|7.7e-12,zf-RING_11|PF17123.1|6.5e-09,zf-RING_11|PF17123.1|2.9e+03,zf-C3HC4|PF00097.21|1.4e-07,zf-rbx1|PF12678.3|1.4e-06,zf-C3HC4_2|PF13923.2|3e-06,zf-RING_5|PF14634.2|1e-05 S_Transcript_15901:1-444(+)
GCATCTAGAGGACGCCTCCAGGGCCTCAGGCTGCAGCTTGCGCTGCTAGACCGGGAATTCGATGATCTAGTTCCCTCAATGAGTGATGAGGAGATAAATGCTCTACCAGTGCACAAGTATAAGGTTAGCAGTTCCCAAAGTGATGCAGGAGCAGTACAGCAGGCATCATCGTCATCAACGTCTCCTCAGAAGCAGCATGATATTTCCATCAACTTAGGAAGTTCTAAGGGGACCTCCGAAGATGAACTAACTTGTAGTGTTTGCTTGGAGCAAGTAGCTGTGGGCGAACTCATTCGTAGCTTGCCATGTTTACACCAGTACCATGCTAACTGCATTGATCCGTGGCTGAGACAGCAGGGAACATGCCCTGTGTGTAAATTCAAGGTCGGAGCTGGCTGGCATGAAGACGGTCAGGGTGGAGTTGATGCTTCGTTCATTGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_15901.p1 GENE.S_Transcript_15901~~S_Transcript_15901.p1 ORF type:5prime_partial len:148 (+),score=26.34,zf-RING_2|PF13639.2|7.7e-12,zf-RING_11|PF17123.1|6.5e-09,zf-RING_11|PF17123.1|2.9e+03,zf-C3HC4|PF00097.21|1.4e-07,zf-rbx1|PF12678.3|1.4e-06,zf-C3HC4_2|PF13923.2|3e-06,zf-RING_5|PF14634.2|1e-05 S_Transcript_15901:1-444(+)
ASRGRLQGLRLQLALLDREFDDLVPSMSDEEINALPVHKYKVSSSQSDAGAVQQASSSSTSPQKQHDISINLGSSKGTSEDELTCSVCLEQVAVGELIRSLPCLHQYHANCIDPWLRQQGTCPVCKFKVGAGWHEDGQGGVDASFIV*

Click here to download the sequence:
Link to NCBI Protein BLAST