Transcript Information: S_Transcript_159171.p1


Annotated TAIR IDAT3G53490.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G02720.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19832666-19834024 | Forward length=225
E-Value9.5E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4979720397488
Replicate 22.2787857758935
Replicate 32.7707396933109
Condition 2: 8 Hour
Replicate 14.8057217616074
Replicate 23.6761253633354
Replicate 35.4040177026713
Condition 3: 24 Hour
Replicate 13.1793022920583
Replicate 24.1497119787678
Replicate 32.9603338503657


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_159171.p1 GENE.S_Transcript_159171~~S_Transcript_159171.p1 ORF type:complete len:213 (+),score=45.49 S_Transcript_159171:103-741(+)
ATGAAAGGGGAAGTAATTAAGGTTGACTGGGTGGTAAAGGAAGAGGAGATCAAAAGAGCCTTGCCATTTTTGCTCAGGGACGGGCCTGTTTTGATGAGTTTTGGGCTTCCAGCTATCAGTTTCCTATTGTTCATCGCTCTTAGAATTTCTCTAAGACAGGTATCGGCTGCAGACGTCACTCTTCATTCAATTCAAATATACCAAACTCATGAGTTGATAAACAAACCAACGGTGTATTTCCAGTGTAAAGGAGAGAACAAGACAATTCTTCCAGATGTCACAAAAGCTAACACTGCATATACTTTCAAAGCGGAAGAATCTTGGCAGCCTTTGACAGAACTTTCAAGTAAGAAGTGCAAGAGATGTGGATTCTATGAGAAGGATTTTTTGCCACTGCATGATGTCTTTGATGAGTGGGAGCTTTGCCCTTCTGATTTTGCAGCTCCTGAAGGGATCTATACTCACATGAAAGAAAAAGAATTGAATGCCACTTTTTTGTGTCTGGCATGCATAGATCTAGGTGCAGGATACAAGTATTGGCAGAAGAGAAAGAGACAGCAAGAACAAGCTCAGTTTCTGAAGCTGTTTGAGGAACATGATGATATGGAGGATGAATTGGGCCTGGGAGAGATTATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_159171.p1 GENE.S_Transcript_159171~~S_Transcript_159171.p1 ORF type:complete len:213 (+),score=45.49 S_Transcript_159171:103-741(+)
MKGEVIKVDWVVKEEEIKRALPFLLRDGPVLMSFGLPAISFLLFIALRISLRQVSAADVTLHSIQIYQTHELINKPTVYFQCKGENKTILPDVTKANTAYTFKAEESWQPLTELSSKKCKRCGFYEKDFLPLHDVFDEWELCPSDFAAPEGIYTHMKEKELNATFLCLACIDLGAGYKYWQKRKRQQEQAQFLKLFEEHDDMEDELGLGEIM*

Click here to download the sequence:
Link to NCBI Protein BLAST