Transcript Information: S_Transcript_159174.p1


Annotated TAIR IDAT3G53490.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G02720.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19832666-19834024 | Forward length=225
E-Value4E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7394118454366
Replicate 22.7398235398221
Replicate 33.3751412440576
Condition 2: 8 Hour
Replicate 14.4602123539102
Replicate 24.0941945223029
Replicate 34.3188972271531
Condition 3: 24 Hour
Replicate 12.4272092767327
Replicate 21.7775538491253
Replicate 33.6266991955069


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_159174.p1 GENE.S_Transcript_159174~~S_Transcript_159174.p1 ORF type:complete len:153 (+),score=21.45 S_Transcript_159174:78-536(+)
ATGAAAGGGGAAGTAATTAAGGTTGACTGGGTGGTAAAGGAAGAGGAGATCAAAAGAGCCTTGCCATTTTTGCTCAGGGACGGGCCTGTTTTGATGAGTTTTGGGCTTCCAGCTATCAGTTTCCTATTTTTTATCGCTCTTAGAATTTCTCTGAGACATGTATCGGCTGCAGACGTCACTCTTCATTCAATTCAAATATACCAAACTCATGAGTTGATAAACAAACCAACGGTGTATTTCCAGTGTAAAGGAGAGAACAAGACAATTCTTCCAGATGTCACAAAAGCCAACACTGTATATACTTTCAAAGGGGAAGAATCTTGGCAGAACTTTCAAGTAAGAAGTGCAAGAGATGTGGATTCTATGAGAAGGATTTTTTGCCACTGCATGATGTCTTTGATGAGTGGGAGCTTTGCCCTTCTGATTTTGCAGCTCCTGAAGGGATCTATACTCACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_159174.p1 GENE.S_Transcript_159174~~S_Transcript_159174.p1 ORF type:complete len:153 (+),score=21.45 S_Transcript_159174:78-536(+)
MKGEVIKVDWVVKEEEIKRALPFLLRDGPVLMSFGLPAISFLFFIALRISLRHVSAADVTLHSIQIYQTHELINKPTVYFQCKGENKTILPDVTKANTVYTFKGEESWQNFQVRSARDVDSMRRIFCHCMMSLMSGSFALLILQLLKGSILT*

Click here to download the sequence:
Link to NCBI Protein BLAST