Transcript Information: S_Transcript_159206.p1


Annotated TAIR IDAT1G77110.1
Annotated Gene NameAuxin efflux carrier family protein
Annotated Gene Symbol(s)PIN6
Annotation TypeOrtholog
Chromosome Positionchr1:28970855-28974408 | Forward length=570
E-Value3.1E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3909234095042
Replicate 20.46124298726512
Replicate 30.57834364025228
Condition 2: 8 Hour
Replicate 10.89165395054215
Replicate 21.0913096897428
Replicate 30.96552619813504
Condition 3: 24 Hour
Replicate 10
Replicate 20.55277589210603
Replicate 30.43940843911352


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_159206.p1 GENE.S_Transcript_159206~~S_Transcript_159206.p1 ORF type:5prime_partial len:287 (+),score=71.52,Mem_trans|PF03547.14|7.6e-73 S_Transcript_159206:2-862(+)
ATTTTCTCACCTGCTGCTGGGCCCACTGCTGCTAAGAAGAAAGGTGGTGGTGGTGATGGTGGTGGAAAGGATCTTCATATGTTTGTATGGAGTTCAAGTGCTTCTCCTGTTTCTGAAGCTGGTTTGCATGTCTTTAGAGGTGGTGGTGCTACTGCTACTACTAATCCTGATTTTGGTGGTCATGATCTTGGTGGGGTAGCTCACCCTAAAGATTATGATGATTATGGAAGGGATGAGTTTAGCTTTGGGAATAGGCCCGGTGGGCCGGAAGGGGAAGGCCCAACATTGTCAAAGCTCGGTTCGAGCTCGACCACCGAGCTCCGGCCCAAGGCAGCTGCTCAGGGTGAATCCAAACCAACTTCTATGCCCCCTGCAAGTGTTATGACCAGGCTCATCTTGATCATGGTTTGGAGGAAACTTATCAGGAACCCTAACACATACTCTAGTCTCATTGGCCTTACTTGGTCCTTGATTGCTTTTAGGTGGAACATCAAAATGCCTGCCATTGTAGCGGGTTCGATCAAAATTCTCTCAGATGCAGGGCTTGGCATGGCTATGTTCAGTCTTGGTTTGTTCATGGCGTTGCAGCCAAGGATCATTGCTTGTGGGAATGCCATGGCCACCTTCGCTATGGCGGTCAGGTTCATTACGGGACCTGCAGTCATGGCGGCCGCCTCAATTGCTGTTGGACTAAGAGGCTCTCTCTTGCACATTGCCATTGTCCAGGCAGCTTTGCCACAAGGAATTGTCCCTTTTGTCTTTGCCAAGGAATACAATGTCCATCCTGACATTCTCAGCACAGCGTACCCACTCTCCTCCTTAACTCAACCTAGAACACACATGATAGTACATTGCATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_159206.p1 GENE.S_Transcript_159206~~S_Transcript_159206.p1 ORF type:5prime_partial len:287 (+),score=71.52,Mem_trans|PF03547.14|7.6e-73 S_Transcript_159206:2-862(+)
IFSPAAGPTAAKKKGGGGDGGGKDLHMFVWSSSASPVSEAGLHVFRGGGATATTNPDFGGHDLGGVAHPKDYDDYGRDEFSFGNRPGGPEGEGPTLSKLGSSSTTELRPKAAAQGESKPTSMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLIAFRWNIKMPAIVAGSIKILSDAGLGMAMFSLGLFMALQPRIIACGNAMATFAMAVRFITGPAVMAAASIAVGLRGSLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTAYPLSSLTQPRTHMIVHCI*

Click here to download the sequence:
Link to NCBI Protein BLAST