Transcript Information: S_Transcript_159311.p1


Annotated TAIR IDAT5G55740.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)CRR21
Annotation TypeOrtholog
Chromosome Positionchr5:22561941-22564433 | Reverse length=830
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2335110653618
Replicate 20.86921766507011
Replicate 31.0685246861877
Condition 2: 8 Hour
Replicate 12.8170272261334
Replicate 23.2144950536803
Replicate 34.1248511587855
Condition 3: 24 Hour
Replicate 10.63281817759543
Replicate 21.1292513299918
Replicate 31.2859443265644


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_159311.p1 GENE.S_Transcript_159311~~S_Transcript_159311.p1 ORF type:5prime_partial len:863 (+),score=140.16,PPR_2|PF13041.2|0.0088,PPR_2|PF13041.2|6.6,PPR_2|PF13041.2|0.31,PPR_2|PF13041.2|9.5e-10,PPR_2|PF13041.2|7.4,PPR_2|PF13041.2|5.9e-08,PPR_2|PF13041.2|56,PPR_2|PF13041.2|3.1e-06,PPR_2|PF13041.2|1.8e-14,PPR_2|PF13041.2|5.3e-10,PPR_2|PF13041.2|9.3,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|0.1,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|11,PPR|PF01535.16|0.0066,PPR|PF01535.16|7.3e+03,PPR|PF01535.16|13,PPR|PF01535.16|0.00077,PPR|PF01535.16|6.8e-06,PPR|PF01535.16|9.5e+03,PPR|PF01535.16|0.15,PPR|PF01535.16|0.0012,PPR|PF01535.16|15,PPR|PF01535.16|0.00022,PPR|PF01535.16|2.2e-06,PPR|PF01535.16|7.9e-06,PPR|PF01535.16|0.19,PPR|PF01535.16|6.6e-05,PPR|PF01535.16|0.0019,PPR|PF01535.16|0.0037,PPR|PF01535.16|0.4,PPR_3|PF13812.2|0.31,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|2.9e+02,PPR_3|PF13812.2|2,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|0.61,PPR_3|PF13812.2|7.4,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.004,PPR_3|PF13812.2|0.00073,PPR_3|PF13812.2|0.0056,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|0.00096,PPR_3|PF13812.2|28,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|48,PPR_1|PF12854.3|0.77,PPR_1|PF12854.3|0.36,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|5.2e+03,PPR_1|PF12854.3|2.7,PPR_1|PF12854.3|0.0024,PPR_1|PF12854.3|5.2e+02,PPR_1|PF12854.3|0.1,PPR_1|PF12854.3|4e-06,PPR_1|PF12854.3|2e-06,PPR_1|PF12854.3|2.1e+03,PPR_1|PF12854.3|27,PPR_1|PF12854.3|9.4e+02,PPR_1|PF12854.3|0.00073,PPR_1|PF12854.3|0.15 S_Transcript_159311:3-2591(+)
ATAACAACGGTTGACGAAAATGTCCTTTTATGTCTGGATGACCACGAGGACGAAGACCATCACATTATCCTCCTTTGCTCTGTTCCTCTTTCATGCATGGCTTCTCTGTCACCAATCAACCCAACCACAAATCTTAATCTTCATTACTTTAACAAACCAAAAATTCTCTCAAACCATCTCAAGTGTAAAAAACCAACCCATGTTCACAAAACTTACAAGTCTTACTCTTACCTCACAAATATCTCTTCTTTCTCTAAGAATGGCCAAATTCAAGAAGCCCTCAACCTTCTTTCTCACATGGAATGCAATGGTCTTCACATTGGTCCTGAACATTATGCTGAATTGCTTCAAGCTTGTGTGTATGAACGATCTTTTATTTTGGGTAAGCAAATTCATGGACTAATCATCAAAAGGGGTGATCTTTATGCAAAAAATGAGTACATTGAAACCAAGTTAGTTATATTTTATGCTAAATGTGATGCCTTTGAGAGTGCAAACTTATTGTTTAGTAGATTGTTTGTAAAGAATGTTTTTTCATGGGCTGCTATTATTGGGATGAATTCTAGACTAGGGTTTAATGAACAAGCTTTATGGGGTTTTTGTGAAATGCTCAATGGTGGGATCTTTCCTGATAATTTTGTTGTTCCTAATGCATTGAAGGCTTGTGGTGGAAGTCAATGTGTTGAGTTTGGAAAAGGAGTTCATGGGTATGTTCTTAAGGTGGGTTTTGAAGAGTGTGTGTATGTTGCCAGTAGTTTGGTTGATATGTATAGTAAATGCGGGGTTCTGGATGATGCAGAGAAGGTGTTTGTTAAAATGCTTGAGAGAAATGTTGTAGTATGGAATTCTATGATTGTGGGTTATGTACAAAATGGGATGGATGAAGAGGCAATTCGTACGTTTTATAATATGAGGTTTGAAGGGTTTGAGCCTACTAGGGTCACTATATCTAGTTTGCTTTCGGCATCAGGGAATTTAGGGGCTGTTGAAGAAGGTAGGCAAGGTCATGCTCTTGCTGTTTTGTATGGTATAGAGTTGGGTAATATTTTGGGGAGTTCAATAATCAACTTCTATTCCAAGGTTGGTTTGATTCATGATGCTGAATTAGTTTTCACAAGGATGATGGATAAGGATGTAGTTACATGGAATTTATTAATTTCTTGTTATGTCCAACATGGCTTGGTTGGAAAGGCAGTATATATGTGTCGTTGGATGAGATTACAAGGGTTAGGGTTTGATTGTGTAACTATGGCTTCTTTGTTATCTGCCTGTGCTGATTCTACTGATATTAAACTTGGTAAGGAGGCCCATTGCTATTGTATCAGGCATAGCCTTGATTCAGATGTGGTTGTTGCGGCTTGCATGGTAGATATGTATTCCAAATGTGAGGAACTAGATTATGCAAGACGAGTGTTTGAGTCTAGCTTAGAGAAGGATCTTGTGTTATGGAACACTATCATAGCTGCTTATGCTGAACTGGGCTCAAGTGGCGAAGCCTTGAATTTGTTTTATCAGATGCAGCTACAAGGTTTTCATCCCAATGTGATATCATGGAACTCGATACTTGCAGGCTTTCTGAGGAATGGTCAGTTGAGTGAGGCACACGACCTGTTTTTACAAATGCAATCCCTTGGCATTGAGCCTAATGTGGTCACCTGGACTACCTTTGTGACGGGTCTAGCGCAAAATGGCCTGGGAGTTGAGGCAATGCTGCTCTTTCAGCAAATGCAGAAGGCCGGGATACAACCAAATACAGTGAGTCTAACTGGCATGCTTGCAGTTTGCGTAGGCATGGTATCCTTACAGCTTGGAAAAGCAGTTCATGGATATGTCGTAAGGCATTGCCTGTGCTTTAACACTGAAATGGTGACTTCTTTGTTGGACATGTATGCCAAGTGTGGAAGTATAGACCTCGCACAAAAGGTTTTTAACAGAACATCAAACAAAGAGTTAGCAGTGTACAATGCTATGATAACTGCTTATGGATTACATAGTCAAGCTCTAAAAGCTCTGGCATTGTATAAGCATATGCAGGAGGAGGGTATAGAACCAGATGATGTAACCTTCACCAGCATCCTTTCGTCCTGTACCCATGAAGGGCTGGTCGATGAAGGGTTGATGGTTTTTGCTGATATGCTCTCTTTGTACAATAGAAGTCCCAGCATAGAACATTATGGCTGTTTGATTAATCTTCTTTCTAAATGTGGCAACCTAGATGAGGCTCTTAGGCTCATTTTCACTATGTCATCTGAGCCAGATGCCCAAATATTGGGATCGATACTTTGTGTCTGTAGGGAACACAAACTAATTGAACTGGGGGAATACATATCCAAATACTTGTGTAAACTGGAACCTGATAATTCTGCAAATTATATAGGCCTGTCAAATATATATGCAGCTTCTGGAAAATGGGTTGAGGCATCAGAATTGCGAAAATTAATGAAGAAACAAGGCCTGGAGAAGAATCCGGGATGCAGTTGGCTTCAAATTGGAACACAGTCTCTTGTGTTTGTTGCCGATGATAAATCACATCCACAAAAGGCCGAAATCAGCATGATGCTTTCTCTATTGGAAAAGGAAATGAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_159311.p1 GENE.S_Transcript_159311~~S_Transcript_159311.p1 ORF type:5prime_partial len:863 (+),score=140.16,PPR_2|PF13041.2|0.0088,PPR_2|PF13041.2|6.6,PPR_2|PF13041.2|0.31,PPR_2|PF13041.2|9.5e-10,PPR_2|PF13041.2|7.4,PPR_2|PF13041.2|5.9e-08,PPR_2|PF13041.2|56,PPR_2|PF13041.2|3.1e-06,PPR_2|PF13041.2|1.8e-14,PPR_2|PF13041.2|5.3e-10,PPR_2|PF13041.2|9.3,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|0.1,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|11,PPR|PF01535.16|0.0066,PPR|PF01535.16|7.3e+03,PPR|PF01535.16|13,PPR|PF01535.16|0.00077,PPR|PF01535.16|6.8e-06,PPR|PF01535.16|9.5e+03,PPR|PF01535.16|0.15,PPR|PF01535.16|0.0012,PPR|PF01535.16|15,PPR|PF01535.16|0.00022,PPR|PF01535.16|2.2e-06,PPR|PF01535.16|7.9e-06,PPR|PF01535.16|0.19,PPR|PF01535.16|6.6e-05,PPR|PF01535.16|0.0019,PPR|PF01535.16|0.0037,PPR|PF01535.16|0.4,PPR_3|PF13812.2|0.31,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|2.9e+02,PPR_3|PF13812.2|2,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|0.61,PPR_3|PF13812.2|7.4,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.004,PPR_3|PF13812.2|0.00073,PPR_3|PF13812.2|0.0056,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|0.00096,PPR_3|PF13812.2|28,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|48,PPR_1|PF12854.3|0.77,PPR_1|PF12854.3|0.36,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|5.2e+03,PPR_1|PF12854.3|2.7,PPR_1|PF12854.3|0.0024,PPR_1|PF12854.3|5.2e+02,PPR_1|PF12854.3|0.1,PPR_1|PF12854.3|4e-06,PPR_1|PF12854.3|2e-06,PPR_1|PF12854.3|2.1e+03,PPR_1|PF12854.3|27,PPR_1|PF12854.3|9.4e+02,PPR_1|PF12854.3|0.00073,PPR_1|PF12854.3|0.15 S_Transcript_159311:3-2591(+)
ITTVDENVLLCLDDHEDEDHHIILLCSVPLSCMASLSPINPTTNLNLHYFNKPKILSNHLKCKKPTHVHKTYKSYSYLTNISSFSKNGQIQEALNLLSHMECNGLHIGPEHYAELLQACVYERSFILGKQIHGLIIKRGDLYAKNEYIETKLVIFYAKCDAFESANLLFSRLFVKNVFSWAAIIGMNSRLGFNEQALWGFCEMLNGGIFPDNFVVPNALKACGGSQCVEFGKGVHGYVLKVGFEECVYVASSLVDMYSKCGVLDDAEKVFVKMLERNVVVWNSMIVGYVQNGMDEEAIRTFYNMRFEGFEPTRVTISSLLSASGNLGAVEEGRQGHALAVLYGIELGNILGSSIINFYSKVGLIHDAELVFTRMMDKDVVTWNLLISCYVQHGLVGKAVYMCRWMRLQGLGFDCVTMASLLSACADSTDIKLGKEAHCYCIRHSLDSDVVVAACMVDMYSKCEELDYARRVFESSLEKDLVLWNTIIAAYAELGSSGEALNLFYQMQLQGFHPNVISWNSILAGFLRNGQLSEAHDLFLQMQSLGIEPNVVTWTTFVTGLAQNGLGVEAMLLFQQMQKAGIQPNTVSLTGMLAVCVGMVSLQLGKAVHGYVVRHCLCFNTEMVTSLLDMYAKCGSIDLAQKVFNRTSNKELAVYNAMITAYGLHSQALKALALYKHMQEEGIEPDDVTFTSILSSCTHEGLVDEGLMVFADMLSLYNRSPSIEHYGCLINLLSKCGNLDEALRLIFTMSSEPDAQILGSILCVCREHKLIELGEYISKYLCKLEPDNSANYIGLSNIYAASGKWVEASELRKLMKKQGLEKNPGCSWLQIGTQSLVFVADDKSHPQKAEISMMLSLLEKEMR*

Click here to download the sequence:
Link to NCBI Protein BLAST