Transcript Information: S_Transcript_159326.p1


Annotated TAIR IDAT4G01570.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:679487-681904 | Forward length=805
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.56131640322341
Replicate 20.90331520520842
Replicate 31.0983267146561
Condition 2: 8 Hour
Replicate 12.539996861594
Replicate 23.1364998713264
Replicate 32.9884500984651
Condition 3: 24 Hour
Replicate 11.1654218239399
Replicate 20.89980393355225
Replicate 31.4707643759807


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_159326.p1 GENE.S_Transcript_159326~~S_Transcript_159326.p1 ORF type:complete len:806 (+),score=142.59,PPR_2|PF13041.2|8.4e+02,PPR_2|PF13041.2|9.2,PPR_2|PF13041.2|5e-06,PPR_2|PF13041.2|0.82,PPR_2|PF13041.2|0.27,PPR_2|PF13041.2|1.4e-13,PPR_2|PF13041.2|0.00025,PPR_2|PF13041.2|6.4e-14,PPR_2|PF13041.2|1.2e-07,PPR_2|PF13041.2|4.5e-10,PPR_2|PF13041.2|2.2,PPR_2|PF13041.2|4.6,PPR_2|PF13041.2|5.4e-11,PPR_2|PF13041.2|1.9e-15,PPR_2|PF13041.2|2.1e-10,PPR_1|PF12854.3|0.024,PPR_1|PF12854.3|4.5e+02,PPR_1|PF12854.3|2.4,PPR_1|PF12854.3|5.1e-07,PPR_1|PF12854.3|6.9e-07,PPR_1|PF12854.3|1.3e-05,PPR_1|PF12854.3|0.0031,PPR_1|PF12854.3|3e-09,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|0.00032,PPR_1|PF12854.3|5.1e-10,PPR_1|PF12854.3|4.7e-08,PPR_1|PF12854.3|3.2e+02,PPR|PF01535.16|0.0014,PPR|PF01535.16|81,PPR|PF01535.16|6.1e+03,PPR|PF01535.16|0.00091,PPR|PF01535.16|5.9e-05,PPR|PF01535.16|7.3e-06,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|0.0003,PPR|PF01535.16|2.5e-06,PPR|PF01535.16|5.1,PPR|PF01535.16|1.5e+03,PPR|PF01535.16|0.0083,PPR|PF01535.16|0.0015,PPR|PF01535.16|2.8e-09,PPR|PF01535.16|0.00025,PPR_3|PF13812.2|9.4e+03,PPR_3|PF13812.2|8.9e-05,PPR_3|PF13812.2|5.7e+03,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|0.0052,PPR_3|PF13812.2|0.00048,PPR_3|PF13812.2|25,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|3,PPR_3|PF13812.2|2.6e+03,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|1.5e-07,PPR_3|PF13812.2|0.0054,MRP-S27|PF10037.5|0.32,MRP-S27|PF10037.5|0.46,MRP-S27|PF10037.5|2.3e+02,MRP-S27|PF10037.5|49,MRP-S27|PF10037.5|1.7e+03,MRP-S27|PF10037.5|3.2,TPR_19|PF14559.2|3.8,TPR_19|PF14559.2|1.9e+03,TPR_19|PF14559.2|1.9e+02,TPR_19|PF14559.2|3.2e+03,TPR_19|PF14559.2|2.8,ECSIT|PF06239.7|4.4e+02,ECSIT|PF06239.7|19,ECSIT|PF06239.7|35,ECSIT|PF06239.7|59,ECSIT|PF06239.7|7.4e+02,ECSIT|PF06239.7|3.4e+02,ECSIT|PF06239.7|6 S_Transcript_159326:299-2716(+)
ATGCAGAACTCTCTAGTTGTTGCTTTGTGGAGAAAGGGCCGCTTCTTCTGCTCCTTCACATCTGGCCAATTACACAGATCAAAATCGAGCCCTGCTCGTGTGTTTGATCTTGGGAACCTTCTCCTCACTGCCTATATTACCAAAACTTTGTCTGAATCTGGAACCCGAAATCTTGATGCCAATTCCATACCTGTCTCTGAGAGTCTGGTAGTTGATGTGCTTCGAAGGGCCTCCCTTGATACTTCTAAAAAGATTGATTTCTTTCGTTGGTGCTCTGACCGGTATGGTTATAAACACTCCTCTGAAACTTACACCGAGATCTTCCGTGTACTTTGTCGTTCTAGGAGTCCCGTCTACCTTAATAATCATGTGGTCCATAACTTCTTAAATTCCATGAAGCATGATGGTGCTGTCATTGATTCAGACACCTTTAAGCTTCTCTTGGATGCTTTCATCAAGTCGGGTCAGATTGATTCTGCTCTTGAAGTTCTTGATCACATGGATGAATTGGGGGTGAGCTTGAATGTCCACATGTATAATTCTGTTGTCATTGCTCTAGTTCGAAAGAAAGAACTTGGTTTAGCTTCGACTATGTTTACCAACCTCCTAGAAAATTCAGGTGCTGTTGTCCCCTGTGAGCCAATTGCCTGCAATGAATTGCTTGTTTCTCTCAGAAGAGCTGGAATGAAGGCAGAGTTCAAGAAAGTTTTTGACATTTTGAGAGAAAAAAAGGTTGCGTTGGATACATGGGGATATAATATATGTATTCATTCATTTGGATGTTGGGGTGATCTAGAGACTTCTCTACATCTATTTAAAGAGATGAAGGAATCAAGTACAGGTTCATTTAGTGATCCTGATTTGTGTACATATAACAGCCTCATCCACGTCCTATGCTTGGTTGGGAAAACAAAGGATGCACTCAATGTTTGGGAAGAGCTGAGATGCTCAGGACATGAGCCAGATGCCTTCACCTACCGTATACTAATTCAAGGCTGCTCCAAATCATATCGAGTTGAAGATGCAACTAAGATCTTTAATGAAATGCAGTGTAATGGTTTCCGACCAGATACCATTATATACAATTCTCTTCTGGATGTCTTTCTGAAGGCAAGGAAACTCACTGAAGCCTGCCAGCTTTTTGAGAGGATGACTCAAGATGGGATAAGGGCAACCTGTTGGACGTATAATATTCTTATTGATGGTTTGATTAAGAATGGGAGAGCTATTGCAGGTTACACCCTATTTTGTGATTTGAAAAAGAAGGGAAAGTTTGTGGATGGCATTACTTATAGCATTATCATTTTGCATCTCTGTAGAGAGGGCCAGCTTGATGAAGCATTTCAACTGGTCGAAGAGATGGAAGACAGAGGTTTCATTATTGATCTGGTGACTATAACTTCTCTCTTAATTGCGCTTTATAAGCAAGGTCGATGGGATGCAATGGAAAAGCTAATGAGACACATAAGAGAAGGGAATTTATTGCATAATGTTCTGAAGTGGAAAGCTGATATGGAAGCTGTAATGGCACATAAACAGAAAACTAGAAAAGATTTCAGCCCAATGTTTGCTGCTGAAGGTGACTTCAGCGAAATCGTGGATTTGATGTCAGGTGATGTTGAACCAGATAGCAACTTGCATTCCGGTAAAGACTTAGAGACAAACCCTGCAGATGTGGATGAGTGGTCATCATCCCCTTATATGGATTGGCTGGCAAATGAATTTAATCCCAATACCAATATCTTTAAATGGTTTTCCTTGTCCAAGGGAAAACGAGTTCAAGACAAAGGGATGGGCTCTTTTGATATTGACATGGTTAATACATACTTGTCCATATTTTTGGCAAAGGGGCAGTTGAGTGTAGCTTGCAAATTGTTTGCGATATTCACAGATATGGGTGCTGAAGCCATGAGTTACACATACAATTCTATCATGAGTTCATTTGTGAAGAAGGGTTATTTCAATCAGACATGGGGAATCCTCAATGAAATGGGTGAGAACCTTTGTCCAGCAGATGTAGCAACATATAACATCATAATTCAAAGCTTGGGAAAAATGGGAAGAGCAGACCTAGCTAGCTCCATTCTAGAGAAGCTAATGAAGGAGGGTGGGTATCTTGACATAGTCATGTACAATACTCTCATGAATGTCCTTGGGAAGGCTGGTAGGGTTGATGAAGCTTGCAAATTGTTTGAGCAGATGAGAAATAGTGGGATAAATCCTGATGTTGTCACTTTCAATACACTTATTGAAATTCATACGAAAGTGGGTAGAATAAAAGATGCGCACAAATTTTTGAGGATGATGTTAGATGCTGGCTGTTTACCCAATCACGTAACTGATACAATACTGGATGTTCTTGGAAAAGAAATGGAGAAATCCAGGCACCAAAAGGGAACAACAAAGTTCACTGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_159326.p1 GENE.S_Transcript_159326~~S_Transcript_159326.p1 ORF type:complete len:806 (+),score=142.59,PPR_2|PF13041.2|8.4e+02,PPR_2|PF13041.2|9.2,PPR_2|PF13041.2|5e-06,PPR_2|PF13041.2|0.82,PPR_2|PF13041.2|0.27,PPR_2|PF13041.2|1.4e-13,PPR_2|PF13041.2|0.00025,PPR_2|PF13041.2|6.4e-14,PPR_2|PF13041.2|1.2e-07,PPR_2|PF13041.2|4.5e-10,PPR_2|PF13041.2|2.2,PPR_2|PF13041.2|4.6,PPR_2|PF13041.2|5.4e-11,PPR_2|PF13041.2|1.9e-15,PPR_2|PF13041.2|2.1e-10,PPR_1|PF12854.3|0.024,PPR_1|PF12854.3|4.5e+02,PPR_1|PF12854.3|2.4,PPR_1|PF12854.3|5.1e-07,PPR_1|PF12854.3|6.9e-07,PPR_1|PF12854.3|1.3e-05,PPR_1|PF12854.3|0.0031,PPR_1|PF12854.3|3e-09,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|0.00032,PPR_1|PF12854.3|5.1e-10,PPR_1|PF12854.3|4.7e-08,PPR_1|PF12854.3|3.2e+02,PPR|PF01535.16|0.0014,PPR|PF01535.16|81,PPR|PF01535.16|6.1e+03,PPR|PF01535.16|0.00091,PPR|PF01535.16|5.9e-05,PPR|PF01535.16|7.3e-06,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|0.0003,PPR|PF01535.16|2.5e-06,PPR|PF01535.16|5.1,PPR|PF01535.16|1.5e+03,PPR|PF01535.16|0.0083,PPR|PF01535.16|0.0015,PPR|PF01535.16|2.8e-09,PPR|PF01535.16|0.00025,PPR_3|PF13812.2|9.4e+03,PPR_3|PF13812.2|8.9e-05,PPR_3|PF13812.2|5.7e+03,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|0.0052,PPR_3|PF13812.2|0.00048,PPR_3|PF13812.2|25,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|3,PPR_3|PF13812.2|2.6e+03,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|1.5e-07,PPR_3|PF13812.2|0.0054,MRP-S27|PF10037.5|0.32,MRP-S27|PF10037.5|0.46,MRP-S27|PF10037.5|2.3e+02,MRP-S27|PF10037.5|49,MRP-S27|PF10037.5|1.7e+03,MRP-S27|PF10037.5|3.2,TPR_19|PF14559.2|3.8,TPR_19|PF14559.2|1.9e+03,TPR_19|PF14559.2|1.9e+02,TPR_19|PF14559.2|3.2e+03,TPR_19|PF14559.2|2.8,ECSIT|PF06239.7|4.4e+02,ECSIT|PF06239.7|19,ECSIT|PF06239.7|35,ECSIT|PF06239.7|59,ECSIT|PF06239.7|7.4e+02,ECSIT|PF06239.7|3.4e+02,ECSIT|PF06239.7|6 S_Transcript_159326:299-2716(+)
MQNSLVVALWRKGRFFCSFTSGQLHRSKSSPARVFDLGNLLLTAYITKTLSESGTRNLDANSIPVSESLVVDVLRRASLDTSKKIDFFRWCSDRYGYKHSSETYTEIFRVLCRSRSPVYLNNHVVHNFLNSMKHDGAVIDSDTFKLLLDAFIKSGQIDSALEVLDHMDELGVSLNVHMYNSVVIALVRKKELGLASTMFTNLLENSGAVVPCEPIACNELLVSLRRAGMKAEFKKVFDILREKKVALDTWGYNICIHSFGCWGDLETSLHLFKEMKESSTGSFSDPDLCTYNSLIHVLCLVGKTKDALNVWEELRCSGHEPDAFTYRILIQGCSKSYRVEDATKIFNEMQCNGFRPDTIIYNSLLDVFLKARKLTEACQLFERMTQDGIRATCWTYNILIDGLIKNGRAIAGYTLFCDLKKKGKFVDGITYSIIILHLCREGQLDEAFQLVEEMEDRGFIIDLVTITSLLIALYKQGRWDAMEKLMRHIREGNLLHNVLKWKADMEAVMAHKQKTRKDFSPMFAAEGDFSEIVDLMSGDVEPDSNLHSGKDLETNPADVDEWSSSPYMDWLANEFNPNTNIFKWFSLSKGKRVQDKGMGSFDIDMVNTYLSIFLAKGQLSVACKLFAIFTDMGAEAMSYTYNSIMSSFVKKGYFNQTWGILNEMGENLCPADVATYNIIIQSLGKMGRADLASSILEKLMKEGGYLDIVMYNTLMNVLGKAGRVDEACKLFEQMRNSGINPDVVTFNTLIEIHTKVGRIKDAHKFLRMMLDAGCLPNHVTDTILDVLGKEMEKSRHQKGTTKFTD*

Click here to download the sequence:
Link to NCBI Protein BLAST