Transcript Information: S_Transcript_159332.p1


Annotated TAIR IDAT2G17140.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:7462820-7465740 | Forward length=874
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.46998677678023
Replicate 20.34092610795277
Replicate 30.65139906697044
Condition 2: 8 Hour
Replicate 11.4828913796682
Replicate 22.0001321631544
Replicate 31.8586666233924
Condition 3: 24 Hour
Replicate 10.40989295732903
Replicate 20.5253201358756
Replicate 30.72381142884439


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_159332.p1 GENE.S_Transcript_159332~~S_Transcript_159332.p1 ORF type:complete len:906 (+),score=175.74,PPR_2|PF13041.2|2e+03,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|3.9e-15,PPR_2|PF13041.2|0.0021,PPR_2|PF13041.2|5.7e-12,PPR_2|PF13041.2|2.3e-08,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|3.1e-11,PPR_2|PF13041.2|4.6e-16,PPR_2|PF13041.2|1.3e-09,PPR_2|PF13041.2|6.7e-10,PPR_2|PF13041.2|0.00032,PPR_2|PF13041.2|1.7e-05,PPR_2|PF13041.2|1e-12,PPR_2|PF13041.2|1.8e-11,PPR_2|PF13041.2|1.6e-15,PPR_2|PF13041.2|1.1e+03,PPR_2|PF13041.2|0.0019,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|2.7e+03,PPR_1|PF12854.3|3.2e-12,PPR_1|PF12854.3|5e-10,PPR_1|PF12854.3|3.4e-10,PPR_1|PF12854.3|1.3e-09,PPR_1|PF12854.3|6.8e-07,PPR_1|PF12854.3|9.4,PPR_1|PF12854.3|7e-09,PPR_1|PF12854.3|6.7e-08,PPR_1|PF12854.3|0.0018,PPR_1|PF12854.3|2.4e-09,PPR_1|PF12854.3|4.8e-08,PPR_1|PF12854.3|6.4e-06,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|3.5e-09,PPR_1|PF12854.3|0.00019,PPR_1|PF12854.3|0.039,PPR|PF01535.16|45,PPR|PF01535.16|3.9,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|2.5e-07,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|1.9e-07,PPR|PF01535.16|0.0033,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|1.7e-05,PPR|PF01535.16|0.062,PPR|PF01535.16|9.1e-05,PPR|PF01535.16|0.0094,PPR|PF01535.16|4.9e-06,PPR|PF01535.16|2.5e-05,PPR|PF01535.16|5.5e-07,PPR|PF01535.16|1.8,PPR|PF01535.16|8.3e+02,PPR|PF01535.16|0.25,PPR_3|PF13812.2|3.9e+03,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|6.4e-05,PPR_3|PF13812.2|0.31,PPR_3|PF13812.2|0.0061,PPR_3|PF13812.2|0.099,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|65,PPR_3|PF13812.2|0.00053,PPR_3|PF13812.2|0.4,PPR_3|PF13812.2|8.1,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|0.00045,PPR_3|PF13812.2|91,PPR_3|PF13812.2|3.2e-06,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|5.5e+02,PPR_3|PF13812.2|1.8e+03,MRP-S27|PF10037.5|1.8e+03,MRP-S27|PF10037.5|2.3,MRP-S27|PF10037.5|1.2,MRP-S27|PF10037.5|5.3e+02,MRP-S27|PF10037.5|0.41,MRP-S27|PF10037.5|5.1,MRP-S27|PF10037.5|1.8e+03,MRP-S27|PF10037.5|0.0045,MRP-S27|PF10037.5|8.9,TPR_19|PF14559.2|2.9e+02,TPR_19|PF14559.2|53,TPR_19|PF14559.2|2e+02,TPR_19|PF14559.2|60,TPR_19|PF14559.2|7.3e+03,TPR_19|PF14559.2|1.6,TPR_19|PF14559.2|2.2e+03,ECSIT|PF06239.7|4.9e+03,ECSIT|PF06239.7|16,ECSIT|PF06239.7|1.3e+03,ECSIT|PF06239.7|1.1e+02,ECSIT|PF06239.7|1.2e+03,ECSIT|PF06239.7|1.3,ATP13|PF12921.3|64,ATP13|PF12921.3|3.8e+03,ATP13|PF12921.3|2.1e+03,ATP13|PF12921.3|2e+02,ATP13|PF12921.3|3.5,ATP13|PF12921.3|10,ATP13|PF12921.3|7.3e+02 S_Transcript_159332:86-2719(+)
ATGAATCAACCAACAACAAAACTCAACACAACCCTTCTCAAGAACTCCAAGACTCCAGCTTTAGCATGGCAAATCTTCAAAAGAACCCTCTTAAACCCATCTTCACCTCCTTTCTCTTCCCTTCAAAAACCCTTAACCATCATCACCCATATCTTAATTCGCGCCAAAATGTATTCCCAACTTGATGATCTTCACACCCATTTTCTCCATCAAAGCAACTCTGTATCATCCCCCGATACCCTCTTTACCCTTGTTCGCATCTTGGCTAAATCAGGCCTTGTAGATAAGGCCCTTGTACAGTTCCAATCTACTAGAAAACATTTTCCTCAAACCCCACCTTCCCTTTTCCTGTACAATTCCCTTCTTGAGTCTTCTATTCAAACAGGTCGGGCTGATTCTGTTCAATTCTTGTATAAAGACATGATCTTTAGTGGGGTTTCCCCGGATGTTTATACTTTCAATCTTTTGATACGTGGGTTGTGTGATTCAGGTCATGTTAAGGATGCACACCAGGTGCTCGACAAAATGCCTGAGAGAGGATGTAGGCCAAATGAGTTTAGTTTCGGTATTTTGATTCGTGGGTATTGTAGAGCGGGGCTGGAGATGGAGGCGTTGGGGATTTTGGATGAAATGAGAAACTTTGGGTTGGTTCCCAATAAGGTTGTGTATAATACATTGATTTCGAGCTTTTGTAAGGAGGGTAAGGATACTGAGGCTGAGGTTTTGGTAGAGAAGATGAGAGAGGATGGTGTAGCTCCTGATGTTGTCACTTTCAATTCTAGGATTGCGGCTTTGTGTAAGGCCGGGAAGATGCTTGAAGCTTCTAGAATTTTTAGGGATATGCAGATAGATGAGGCACTGGGATTGCCTCGACCAAATATTGTTACATTCAATCTTATGCTTGACGGGTTTTGCAAGTTAGGCATGCTGGAGGAATCTGAAACTTTGATTGAGAACATGAAGAAAAGTGGCCTTTCAATGAGGCTAGAGAGTTATAATATATGGTTGATGGGGTTGGTGACGAAGGGGAAGCTTTTTGAAGCGCAGCTGGTTCTCAAAGAGATGGCAGGCAAGGGGATCAAGCCTGATATTTACTCATATAATATTGTGATGGATGGGTTGTGCAAGAATGGTATGTTTTCTGATGCGAAAATGCTGATGAGTTTAATGAAAAGTAGCGGTGTTGCACCTGATGCAGTAACTTATAGCTCTTTGCTTCATGGATTCTGCAGTAAAAGGTTGGTGTTAGAAGCAAATAACACTTTGAATGAGATGATGAGAAGTGGTTGTTTCCCTAGCGTTTATGCTTGCAATATTTTGCTACATAGCTTGTGGAATGAGGGGAAAATATCAGAGGCAGAGAGGTTGCTACAGAAAATAAATGAGAAGGGCTATGATCTGGATACTACAACGTGTAACATAGTGATTCATGGTCTCTGCAAAAGCGGAAAGCTGGATAAAGCTATTGAAGCTGTTGAGGGGATGTGGAATCATGGAAAGGCTGCTCTTGGTGATCTCGGGAAACTCTATGTTGGCCTGATAGATAACAGCAGCGATGCAAAGAAATGCATCCCTGATTTAATTACATATTCAATCATTATCAAAGAACTATGTGAGGCTGGCAGGATTGAAGACGCTAAAAAGAAGTTGATTGAGATGGTAGGGAAAAAAGTATATCCTGATTCAATTATATACAATACTTTCATACAGAGTTACAGTAAAATTGGGAAGGTATCATCTGCATTCCGGGTTCTGAAGGACATGGAGAAAAAGGGGCTTGACAAAAATTTGCAGACTTATAATTCTTTGATCATGGGCTTGGGGATTAACAATCAAATTTTTGAGATGTATGGATTTCTTAATGAGATGAGAGAACGAGGCATCACTCCAAGTGTACATACCTACAATACTATAATCGGTTGCCTTTGTGATACTGGTCAAACCAATGATGCTATGTCTCTTTTGAATGAGATGTTACAGAAAGGTGTAGTTCCTAATATTCACTCTTTCAGACTGCTAATCAAGGCCTTCTGTGAAGAAGGTGAATTCACAGCCGCACAAGAAGTTTTCGAAATTGCTATCAATGCTTGTGGCCATAAGGAAGCACTCTACAGTGCCATGTTTAATGAGCTTCTTCTAGGAGGGGAAATTTCTGAAGCTGGTGAATTGTTTGCAGCTGCTGTAGACCAGCATCTTTACATTGGAAAGTTAAATTACAAAGACCTGATTGACAGATTCTGCAAGGATGAAAATTTGGAAGATGCTATCCGAATTCTCCATAAACTGATCAGTCAAGGATACAGTTTTGACCCTGCTACATTCATGCCAGTGATTGATACTTTGCGTAAAGTGGGAAAGAAACAAGAAGCAGATGATTTTTCTGAGAGGATGTTGTTTATGTCATCAGACGGCAAAGTCACAGATAAAGTGTGTTGTGACAACATTGGAGGTGATCTTGTAAATTCAAAGAAACAAGGTGAAAGTGAATGGGAAAATATACTACACAGAGAGGATGGCAGTGGAATAGCACTCAGATCTCTTAAGCGGGTACAAAGTGGATGGGGACAGGGAAGCATATTAAACCTGCAATTCCCAAAAAAAGACCCACATGATTTTTGGGAGGATGAAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_159332.p1 GENE.S_Transcript_159332~~S_Transcript_159332.p1 ORF type:complete len:906 (+),score=175.74,PPR_2|PF13041.2|2e+03,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|3.9e-15,PPR_2|PF13041.2|0.0021,PPR_2|PF13041.2|5.7e-12,PPR_2|PF13041.2|2.3e-08,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|3.1e-11,PPR_2|PF13041.2|4.6e-16,PPR_2|PF13041.2|1.3e-09,PPR_2|PF13041.2|6.7e-10,PPR_2|PF13041.2|0.00032,PPR_2|PF13041.2|1.7e-05,PPR_2|PF13041.2|1e-12,PPR_2|PF13041.2|1.8e-11,PPR_2|PF13041.2|1.6e-15,PPR_2|PF13041.2|1.1e+03,PPR_2|PF13041.2|0.0019,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|2.7e+03,PPR_1|PF12854.3|3.2e-12,PPR_1|PF12854.3|5e-10,PPR_1|PF12854.3|3.4e-10,PPR_1|PF12854.3|1.3e-09,PPR_1|PF12854.3|6.8e-07,PPR_1|PF12854.3|9.4,PPR_1|PF12854.3|7e-09,PPR_1|PF12854.3|6.7e-08,PPR_1|PF12854.3|0.0018,PPR_1|PF12854.3|2.4e-09,PPR_1|PF12854.3|4.8e-08,PPR_1|PF12854.3|6.4e-06,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|3.5e-09,PPR_1|PF12854.3|0.00019,PPR_1|PF12854.3|0.039,PPR|PF01535.16|45,PPR|PF01535.16|3.9,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|2.5e-07,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|1.9e-07,PPR|PF01535.16|0.0033,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|1.7e-05,PPR|PF01535.16|0.062,PPR|PF01535.16|9.1e-05,PPR|PF01535.16|0.0094,PPR|PF01535.16|4.9e-06,PPR|PF01535.16|2.5e-05,PPR|PF01535.16|5.5e-07,PPR|PF01535.16|1.8,PPR|PF01535.16|8.3e+02,PPR|PF01535.16|0.25,PPR_3|PF13812.2|3.9e+03,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|6.4e-05,PPR_3|PF13812.2|0.31,PPR_3|PF13812.2|0.0061,PPR_3|PF13812.2|0.099,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|65,PPR_3|PF13812.2|0.00053,PPR_3|PF13812.2|0.4,PPR_3|PF13812.2|8.1,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|0.00045,PPR_3|PF13812.2|91,PPR_3|PF13812.2|3.2e-06,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|5.5e+02,PPR_3|PF13812.2|1.8e+03,MRP-S27|PF10037.5|1.8e+03,MRP-S27|PF10037.5|2.3,MRP-S27|PF10037.5|1.2,MRP-S27|PF10037.5|5.3e+02,MRP-S27|PF10037.5|0.41,MRP-S27|PF10037.5|5.1,MRP-S27|PF10037.5|1.8e+03,MRP-S27|PF10037.5|0.0045,MRP-S27|PF10037.5|8.9,TPR_19|PF14559.2|2.9e+02,TPR_19|PF14559.2|53,TPR_19|PF14559.2|2e+02,TPR_19|PF14559.2|60,TPR_19|PF14559.2|7.3e+03,TPR_19|PF14559.2|1.6,TPR_19|PF14559.2|2.2e+03,ECSIT|PF06239.7|4.9e+03,ECSIT|PF06239.7|16,ECSIT|PF06239.7|1.3e+03,ECSIT|PF06239.7|1.1e+02,ECSIT|PF06239.7|1.2e+03,ECSIT|PF06239.7|1.3,ATP13|PF12921.3|64,ATP13|PF12921.3|3.8e+03,ATP13|PF12921.3|2.1e+03,ATP13|PF12921.3|2e+02,ATP13|PF12921.3|3.5,ATP13|PF12921.3|10,ATP13|PF12921.3|7.3e+02 S_Transcript_159332:86-2719(+)
MNQPTTKLNTTLLKNSKTPALAWQIFKRTLLNPSSPPFSSLQKPLTIITHILIRAKMYSQLDDLHTHFLHQSNSVSSPDTLFTLVRILAKSGLVDKALVQFQSTRKHFPQTPPSLFLYNSLLESSIQTGRADSVQFLYKDMIFSGVSPDVYTFNLLIRGLCDSGHVKDAHQVLDKMPERGCRPNEFSFGILIRGYCRAGLEMEALGILDEMRNFGLVPNKVVYNTLISSFCKEGKDTEAEVLVEKMREDGVAPDVVTFNSRIAALCKAGKMLEASRIFRDMQIDEALGLPRPNIVTFNLMLDGFCKLGMLEESETLIENMKKSGLSMRLESYNIWLMGLVTKGKLFEAQLVLKEMAGKGIKPDIYSYNIVMDGLCKNGMFSDAKMLMSLMKSSGVAPDAVTYSSLLHGFCSKRLVLEANNTLNEMMRSGCFPSVYACNILLHSLWNEGKISEAERLLQKINEKGYDLDTTTCNIVIHGLCKSGKLDKAIEAVEGMWNHGKAALGDLGKLYVGLIDNSSDAKKCIPDLITYSIIIKELCEAGRIEDAKKKLIEMVGKKVYPDSIIYNTFIQSYSKIGKVSSAFRVLKDMEKKGLDKNLQTYNSLIMGLGINNQIFEMYGFLNEMRERGITPSVHTYNTIIGCLCDTGQTNDAMSLLNEMLQKGVVPNIHSFRLLIKAFCEEGEFTAAQEVFEIAINACGHKEALYSAMFNELLLGGEISEAGELFAAAVDQHLYIGKLNYKDLIDRFCKDENLEDAIRILHKLISQGYSFDPATFMPVIDTLRKVGKKQEADDFSERMLFMSSDGKVTDKVCCDNIGGDLVNSKKQGESEWENILHREDGSGIALRSLKRVQSGWGQGSILNLQFPKKDPHDFWEDEV*

Click here to download the sequence:
Link to NCBI Protein BLAST