Transcript Information: S_Transcript_159487.p1


Annotated TAIR IDAT5G44740.2
Annotated Gene NameY-family DNA polymerase H
Annotated Gene Symbol(s)POLH
Annotation TypeHomolog
Chromosome Positionchr5:18047903-18051779 | Reverse length=672
E-Value2E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61604169525881
Replicate 20.76606908185815
Replicate 31.109979486513
Condition 2: 8 Hour
Replicate 10.88855792988054
Replicate 21.1393071066527
Replicate 30.74013359739519
Condition 3: 24 Hour
Replicate 10.6573691791151
Replicate 20.4721627411739
Replicate 30.70061234458656


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_159487.p1 GENE.S_Transcript_159487~~S_Transcript_159487.p1 ORF type:complete len:432 (+),score=75.80,IMS_C|PF11799.4|5.2e-14,IMS_C|PF11799.4|1.6e+04 S_Transcript_159487:572-1867(+)
ATGCAGCAGAGACGATGTTGGCTGAGAGTCCTCCAGAGAGTTTGGAGGACATCCATGAGGAGGTTTTCAAATCACATATCCTTGGCCTTCCTGAGAACTTGGCTATGGAATATTGCAAGAGGTATCAGTGGGGAAGAGGTTGAAGGTCGTATCTTACCTAAGAGTCATGGTTCTGGAAAGACATTTCCAGGTCCTTGCGCCTTGAGATCTATAGACACAGTTACCCACTGGCTCAATCAACTGTGTGAAGAACTTAGTGAGCGCCTTCTTGCTGACTTGGACCAAAATAAGAGGATAGCTCACACACTGATGCTGCATGTGAGAGCATACAAGATAAGCGACTTAGATTCTCAAAAGAAGTTCCCTTCCAAGTCTTGTCCCTTGAGATATGGAACTTCTAAGATTCAAGAGGATGCCCTGAGCCTCTTTCATGCCGGGTTAAGAGAATATATGAGCACATATGGAGTCAAGGGTGACAAAAATCAAATTAATGGATGGGGCGTAACTGGACTTTCTGTTTCAGCAAGCAAAATTATTGCTATACCACAAGGAACTTGTACAATCATGCAATTCTTCCCTACCCAATCTACTGTGTGCTCAGTTATATCACGAGCAGATGATAGATCAACCCATGAAGGAGTGCACAGTGTAGGGAATGACAAGAATTTTGGGTCCAAGAATCTATCTAAGAAAGATGAAAGTACAATTCAGAGTTACAGATCAGGTTTAGATCGGAGTGAGGAAACCAGAAAACCTCAGAAGGGTCAGGAGAAAGCCACATCCTGCTCTTCTGCAGACAACACAAATGTTGAAGAAGCTTTATGCTTAACAAGAAATGAGAACAATGATTGCTCCGATATAGGCCAAACTGAACCAACCAACAAGTCTTTTGGTGAAGATCCCTCCTCCGTGTCAGTTAGCCCTGCTTCAAAGCTACCGGATCGTGTGATGGAGGACTCAAAAATGAAGGGAACCTCTTCAATTTTGAAATTCTTGAAGAGGTCTGATCATTCTTGCTCTCAATCAAAGTTTGACTACAATAGGATCATCCAGGAACCACGTGAGCCCACATCTTCTGGGATGACTGAGGTAGCCAGTGTGCTTCAAAGCAGACAGAATGCAGAAAGAGAAAATTGGTTCTACAATGTTCATGAGATTGATCAAAGTATAGTTGACGAGTTACCCCCAGATCTCCAGGAAGAACTAAGAGGCTGGATGCGGCCCCTGAAGCAGCCTCATTCAGCCAAGCGAAGTAGTATAACTTCGTACTTTCCACCCGCCAAAGACACAAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_159487.p1 GENE.S_Transcript_159487~~S_Transcript_159487.p1 ORF type:complete len:432 (+),score=75.80,IMS_C|PF11799.4|5.2e-14,IMS_C|PF11799.4|1.6e+04 S_Transcript_159487:572-1867(+)
MQQRRCWLRVLQRVWRTSMRRFSNHISLAFLRTWLWNIARGISGEEVEGRILPKSHGSGKTFPGPCALRSIDTVTHWLNQLCEELSERLLADLDQNKRIAHTLMLHVRAYKISDLDSQKKFPSKSCPLRYGTSKIQEDALSLFHAGLREYMSTYGVKGDKNQINGWGVTGLSVSASKIIAIPQGTCTIMQFFPTQSTVCSVISRADDRSTHEGVHSVGNDKNFGSKNLSKKDESTIQSYRSGLDRSEETRKPQKGQEKATSCSSADNTNVEEALCLTRNENNDCSDIGQTEPTNKSFGEDPSSVSVSPASKLPDRVMEDSKMKGTSSILKFLKRSDHSCSQSKFDYNRIIQEPREPTSSGMTEVASVLQSRQNAERENWFYNVHEIDQSIVDELPPDLQEELRGWMRPLKQPHSAKRSSITSYFPPAKDTN*

Click here to download the sequence:
Link to NCBI Protein BLAST