Transcript Information: S_Transcript_159489.p1


Annotated TAIR IDAT5G44740.2
Annotated Gene NameY-family DNA polymerase H
Annotated Gene Symbol(s)POLH
Annotation TypeOrtholog
Chromosome Positionchr5:18047903-18051779 | Reverse length=672
E-Value3.3E-255
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.82066523632715
Replicate 20.32397635179904
Replicate 30.62288242279414
Condition 2: 8 Hour
Replicate 10.87681487353851
Replicate 20.9855439929395
Replicate 30.68861769061614
Condition 3: 24 Hour
Replicate 10.51324249023422
Replicate 20.43264251173644
Replicate 30.81480907035617


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_159489.p1 GENE.S_Transcript_159489~~S_Transcript_159489.p1 ORF type:complete len:681 (+),score=130.04,IMS|PF00817.16|1.6e-49,IMS_C|PF11799.4|1.2e-13 S_Transcript_159489:190-2232(+)
ATGCCGGTGACTAAGCCCGTGTCATCAGATGCAAGGGTCATCGCTCATGTCGACATGGATTGCTTCTACGTTCAAGTGGAGCAGAGGAAACAACCTCATTTGAAGGGTCTGCCAACAGCCGTTGTCCAGTACAACGAATGGAAAGGCGGAGCTTTAATTGCTGTTAGTTATGAGGCCAGAAAATTTGGCGTAAAACGTTCCATGCGCGGTGATGAAGCTAAAAAGGTTTGCCCTGATATTCAGCTTGTTCAAGTGCCCGTTGCTCGTGGAAAGGCTGATTTGAATACATATCGCAATGCAGGTTCAGAGGTGGTCTCAATTCTTGCTCGGAAGGGTCGTTGTGAGCGAGCATCTATAGATGAAGTGTATCTTGATTTGACTGATGCAGCAGAGACGATGTTGGCTGAGAGTCCTCCAGAGAGTTTGGAGGACATCCATGAGGAGGTTTTCAAATCACATATCCTTGGCCTTCCTGAGGATGGGACTGATGTTAGAGAACATGTGAGGAATTGGCTTTGTAGAAGTGAAGCCGGCCACTATGATAAATTGCTGTCTTGTGGCGCTCTTATTGTTGCAGAACTCAGGAGACAAGTCCTGACGGAAACTGATTTTACATGTTCTGCTGGAATTGCTCATAATAAGATGCTGGCCAAATTAGCTAGTGGCATGAACAAACCTGCTCAGCAGACTGTTGTGCCATCGGCTGCTGTTAACAAACTTCTTGGGCCCTTGCCTATAAAGAAAATGAAACAACTAGGGGGGAAGCTTGGGGATTCCTTGCAATGTGACCTAGGAGTTAAGACTGTTGGAGATCTATTGCGCTTTTCAGAGCTGAAGCTCCAAGAACATTATGGCATCAATACTGGAACTTGGCTATGGAATATTGCAAGAGGTATCAGTGGGGAAGAGGTTGAAGGTCGTATCTTACCTAAGAGTCATGGTTCTGGAAAGACATTTCCAGGTCCTTGCGCCTTGAGATCTATAGACACAGTTACCCACTGGCTCAATCAACTGTGTGAAGAACTTAGTGAGCGCCTTCTTGCTGACTTGGACCAAAATAAGAGGATAGCTCACACACTGATGCTGCATGTGAGAGCATACAAGATAAGCGACTTAGATTCTCAAAAGAAGTTCCCTTCCAAGTCTTGTCCCTTGAGATATGGAACTTCTAAGATTCAAGAGGATGCCCTGAGCCTCTTTCATGCCGGGTTAAGAGAATATATGAGCACATATGGAGTCAAGGGTGACAAAAATCAAATTAATGGATGGGGCGTAACTGGACTTTCTGTTTCAGCAAGCAAAATTATTGCTATACCACAAGGAACTTGTACAATCATGCAATTCTTCCCTACCCAATCTACTGTGTGCTCAGTTATATCACGAGCAGATGATAGATCAACCCATGAAGGAGTGCACAGTGTAGGGAATGACAAGAATTTTGGGTCCAAGAATCTATCTAAGAAAGATGAAAGTACAATTCAGAGTTACAGATCAGGTTTAGATCGGAGTGAGGAAACCAGAAAACCTCAGAAGGGTCAGGAAGTTGGATTAATCACAAGATTCTGTCAGGAGAAAGCCACATCCTGCTCTTCTGCAGACAACACAAATGTTGAAGAAGCTTTATGCTTAACAAGAAATGAGAACAATGATTGCTCCGATATAGGCCAAACTGAACCAACCAACAAGTCTTTTGGTGAAGATCCCTCCTCTGTGTCAGTTATCCCTGCTTCAAAGCTCCCGGATCGTGTGATGAAGGAGTCAAAAATGAAGGGAACCTCTTCAATTTTGAAATTCTTGAAGAGGTCTGATCATTCTTGCTCTCAATCAAAGTTTGACTACAATAGGATCATCCAGGAACCACGTGAGCCCACATCTTCTGGTATGTCTTCAGTTCTGTTTGCTATTCTCCATTCTATTTTAGGTTGCATTTTAGACCCAGTTTCAATGTCATATTTAAGAGCTACATGGAGTGTAGCTCTAATATCAAATGTAGAAACTCTAAATAACTTGTCAACTTGCAACAATGTGATAAAATCCGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_159489.p1 GENE.S_Transcript_159489~~S_Transcript_159489.p1 ORF type:complete len:681 (+),score=130.04,IMS|PF00817.16|1.6e-49,IMS_C|PF11799.4|1.2e-13 S_Transcript_159489:190-2232(+)
MPVTKPVSSDARVIAHVDMDCFYVQVEQRKQPHLKGLPTAVVQYNEWKGGALIAVSYEARKFGVKRSMRGDEAKKVCPDIQLVQVPVARGKADLNTYRNAGSEVVSILARKGRCERASIDEVYLDLTDAAETMLAESPPESLEDIHEEVFKSHILGLPEDGTDVREHVRNWLCRSEAGHYDKLLSCGALIVAELRRQVLTETDFTCSAGIAHNKMLAKLASGMNKPAQQTVVPSAAVNKLLGPLPIKKMKQLGGKLGDSLQCDLGVKTVGDLLRFSELKLQEHYGINTGTWLWNIARGISGEEVEGRILPKSHGSGKTFPGPCALRSIDTVTHWLNQLCEELSERLLADLDQNKRIAHTLMLHVRAYKISDLDSQKKFPSKSCPLRYGTSKIQEDALSLFHAGLREYMSTYGVKGDKNQINGWGVTGLSVSASKIIAIPQGTCTIMQFFPTQSTVCSVISRADDRSTHEGVHSVGNDKNFGSKNLSKKDESTIQSYRSGLDRSEETRKPQKGQEVGLITRFCQEKATSCSSADNTNVEEALCLTRNENNDCSDIGQTEPTNKSFGEDPSSVSVIPASKLPDRVMKESKMKGTSSILKFLKRSDHSCSQSKFDYNRIIQEPREPTSSGMSSVLFAILHSILGCILDPVSMSYLRATWSVALISNVETLNNLSTCNNVIKSE*

Click here to download the sequence:
Link to NCBI Protein BLAST