Transcript Information: S_Transcript_159784.p1


Annotated TAIR IDAT1G16630.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16270.1); Has 10587 Blast hits to 5736 proteins in 617 species: Archae - 88; Bacteria - 963; Metazoa - 3686; Fungi - 820; Plants - 541; Viruses - 438; Other Eukaryotes - 4051 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:5682212-5684749 | Reverse length=845
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.975474881603
Replicate 21.1742100884952
Replicate 31.1623573161933
Condition 2: 8 Hour
Replicate 11.3739046983027
Replicate 20.9713267616688
Replicate 31.4329981583181
Condition 3: 24 Hour
Replicate 10.27535567425119
Replicate 20.73006675946217
Replicate 30.91844979626473


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_159784.p1 GENE.S_Transcript_159784~~S_Transcript_159784.p1 ORF type:complete len:714 (+),score=203.53 S_Transcript_159784:140-2281(+)
ATGCAAGATGACTTCAAGAAGACTCTCCCCCCCTTACTGCCTAACCCTTCTTCATTAGGGAATGATGAGAATTTGAGTGAGAACAAACGAAATTCACGTCTAACAATAGGTATAAAATCTTTGAAACGCCAACAAAGAAAGCAATCATCATCACCCAAGAATTTAATGGCATCTTCAAAGTCTCTCAACCCAAAGAAGAAGATCTTAGAAGAATGGAAACAAGTTTCTTCTAAGAAACCCTCAATTCTTGGTCCCAAATCAGTTTCTCACCAAGTGGGTACTTCTGATTCTATCTCTGAAATATGTTTGCCTAAAATCCCATCAAGTAATTTTGATGATAATAATAATAATAATGATGGTGGTGATGATGATTCTTTTGTGCCTGATCCATCTATACCACCTTATGATCCTGTCATCAATTATCTCTCCCCTAGGCCAAAATACCTCCGGTACAATCCGAATAGGCGAAGAGAAATCAATCTTAGGAAAGAAAAATATGGGATTGATAACATTAGTCTTAGCCCAAGTGTTTCTGTTGAGTCTCAGACTCAGAGTTCTGCTGTTTATTATTCTACTGCAGAAAGTTGTTACAAGGAAAATGGGCGTAGTGAAGTAGAGGAATTAATGGGTGAGGATGAGGAGGAAGAAGAAGTGACTGAAGTGAGGAAATGGGTTTTGAAATGGGAAATATTAAAGGTTGTGATTGTGTTTGGTGTTTTGATTTTCTCTACTATTTACATATCTTCAGTTAACTCTTCTGTTCCTTTATCTTCAGTAGCTAGAAGAAGGCTTGAAATTGAGTACCATAACCTTGGGAATATAACTTTTGGGGTTGGTTCTTTGAGAAGTGTTGCATTTGGGAATTGGGTCTTTGTTGAGAGTGGAGGATATGAAATGGGTATGTTTGAACTTGATGAAAGTGTTGTTCAACAAGAAGGGAAATCAAGGGAGAGTGATGCTTATGAGGAGGATCAGGAGATTGAGATATCTGAAAATATTGATCATGGTCAAATAATAGTCAAGTTTGATACTGAGGATGATTTACATCCAGTTATGGAAAGTTTGAATGATGAGGATGTGGAAAATGGGGTACTATTAATCAATGCTCAAGCTCCTGATAAGGAAACTGAAGAGGAATATGTGGTTTTTGATTCAATGTCTAATGATGAGCTTGTAGAAGATAAAGTACAAATGGTAGGCTTAGAGCTTAATGAGGTGACAGAAGAGGAAATTCTGGCAAACTTTGATGAGAAAGCTGATGCTTCTGAAGAAGAAATTGTAGTTGAACAGGAGAATGTGAATGATCATGAAATGGGGAAAGTTGATATTCAGTCAAAGTCCAAGGACGGAGAGTTAGAAAAGGAGTTAGTGATGGATGTTGCTGAAGATCAGAATGATGGTATAGTTATAGAGGAAGAAAATATGGTTGACTCTGAGAAGGAAATGATTGAATATGAACTGAAATCAAAGGATAGCAAGCTAGAAATTGTGGCAGATATTGTTACTGAAGATCCCATTGTGGAAGTCTTAGGGCATAGTCAAGTTTGGCTGAACCTAAAGAATATGGATTGGTTTGTGATCTCATCAGCGATGACTTTGGTTACATCCTTGTTAGTAAGGTTCTATTTTAAGTGCAAGAAGGCTTCTTCAAAGACAGTTCCCTCAAATGTGAAGCTGTGCTGTCAACCTGAGTTAGCAGAGAAAAACAGCCTAAAAATGCCACCTAAAGCAGGAGAGAAAATTGAGCAGGTTCTGAAACTTCAGTCTGATTCAAACCCTACAGTTATTGAGATGACTCCTAGATTCATACCCAGAGTGGAGGTGCTCAGTGAGTTTGCTATAGAAGGAGATTTCAGAAACTCACTTAAAACTTGTACTTCTCAAGCTAATGTGCAAGAATGCAAGGAAAGTAACGAAACTCTTCGTCAAGAGAGGAGCAAGGCAAGCCATTCTGCTCGAGCTCCTAGTCGCTCGGAACCATCTGCTTCAGAGTTTTCAATGGCTGATTTTCTTTCATATGAAACCAACAAATATGAGGAAAAGACGACTACTAACGAGGATGGCAAAGAAATGACCGAGGTGACCCCTACTCCACTAAGGAGATCAAGCCGAATTCGGAACCGAGGGCTGACATCTCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_159784.p1 GENE.S_Transcript_159784~~S_Transcript_159784.p1 ORF type:complete len:714 (+),score=203.53 S_Transcript_159784:140-2281(+)
MQDDFKKTLPPLLPNPSSLGNDENLSENKRNSRLTIGIKSLKRQQRKQSSSPKNLMASSKSLNPKKKILEEWKQVSSKKPSILGPKSVSHQVGTSDSISEICLPKIPSSNFDDNNNNNDGGDDDSFVPDPSIPPYDPVINYLSPRPKYLRYNPNRRREINLRKEKYGIDNISLSPSVSVESQTQSSAVYYSTAESCYKENGRSEVEELMGEDEEEEEVTEVRKWVLKWEILKVVIVFGVLIFSTIYISSVNSSVPLSSVARRRLEIEYHNLGNITFGVGSLRSVAFGNWVFVESGGYEMGMFELDESVVQQEGKSRESDAYEEDQEIEISENIDHGQIIVKFDTEDDLHPVMESLNDEDVENGVLLINAQAPDKETEEEYVVFDSMSNDELVEDKVQMVGLELNEVTEEEILANFDEKADASEEEIVVEQENVNDHEMGKVDIQSKSKDGELEKELVMDVAEDQNDGIVIEEENMVDSEKEMIEYELKSKDSKLEIVADIVTEDPIVEVLGHSQVWLNLKNMDWFVISSAMTLVTSLLVRFYFKCKKASSKTVPSNVKLCCQPELAEKNSLKMPPKAGEKIEQVLKLQSDSNPTVIEMTPRFIPRVEVLSEFAIEGDFRNSLKTCTSQANVQECKESNETLRQERSKASHSARAPSRSEPSASEFSMADFLSYETNKYEEKTTTNEDGKEMTEVTPTPLRRSSRIRNRGLTSP*

Click here to download the sequence:
Link to NCBI Protein BLAST