Transcript Information: S_Transcript_160056.p1


Annotated TAIR IDAT3G14080.1
Annotated Gene NameSmall nuclear ribonucleoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4667717-4668989 | Forward length=128
E-Value2.5E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 169.936491618032
Replicate 267.385574307448
Replicate 358.75941496403
Condition 2: 8 Hour
Replicate 162.488353022297
Replicate 261.045664505301
Replicate 356.84226027995
Condition 3: 24 Hour
Replicate 169.090794295833
Replicate 260.788207793924
Replicate 355.527601636069


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_160056.p1 GENE.S_Transcript_160056~~S_Transcript_160056.p1 ORF type:complete len:129 (+),score=20.14,LSM|PF01423.18|4e-18 S_Transcript_160056:607-993(+)
ATGTCTTGGGCCGGTCCAGAAGATCTCTACCTTTCAACTTCTCTTGCCAGCTATCTTGACAGAAAGATTCTTGTGTTACTACGCGATGGGAGAAAACTTTTAGGAACTCTTTGCTCATTTGATCAATTTGCTAACGCGGTCCTTGAAGGTGCATGTGAAAGAGTCATTGTCGGTGATGTCTATTGTGACATTCCATTGGGTTTATACGTGATCCGTGGGGAGAATGTGGTTTTGATTGGTGAATTGGATTCAGACAAAGTGGATCTCCCCGCTCATATGACCCGTGTATCTGTCCCTGAGATTAGACAGGCACAAAAAGCAGAGAGAGAAGCCTCCGACCTTAAAGGCACGATGAGGAAAAGGATGGAGTTCCTTGACATGGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_160056.p1 GENE.S_Transcript_160056~~S_Transcript_160056.p1 ORF type:complete len:129 (+),score=20.14,LSM|PF01423.18|4e-18 S_Transcript_160056:607-993(+)
MSWAGPEDLYLSTSLASYLDRKILVLLRDGRKLLGTLCSFDQFANAVLEGACERVIVGDVYCDIPLGLYVIRGENVVLIGELDSDKVDLPAHMTRVSVPEIRQAQKAEREASDLKGTMRKRMEFLDMD*

Click here to download the sequence:
Link to NCBI Protein BLAST