Transcript Information: S_Transcript_160154.p2


Annotated TAIR IDAT1G56420.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12530.1); Has 58 Blast hits to 58 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:21122772-21124234 | Reverse length=183
E-Value4E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7155438894347
Replicate 24.4421723941305
Replicate 35.8175073552297
Condition 2: 8 Hour
Replicate 13.7212090486272
Replicate 25.2551322308083
Replicate 35.2931970562705
Condition 3: 24 Hour
Replicate 14.5449086456941
Replicate 26.5405630723687
Replicate 34.570437576766


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_160154.p2 GENE.S_Transcript_160154~~S_Transcript_160154.p2 ORF type:complete len:149 (+),score=49.70 S_Transcript_160154:40-447(+)
ATGGTGGAACAAAGCAAAGTTCTCAACAAACCTGGGGCAGAGAAGCAGACCAAGAGGGAGCTCTTTGATGCACTCCGGCAGGAGCTTGAAGTGCCTGTGCTGGAGAAGGCCTCAAAGTCGGTATGGGAATTAATTTTGGACAATAATGGACTAGGGAAGGAAGTTAATGAAACTGTTGAGAGAGTTTTTTGCCGATTGAGTGGTCGCGAGCCTCCACTATTTCCTGCCTCAACCAGTGAGGCCCCGCCAGAGGAGAAAGAGCAGGAGGAGAATCCAAGTTCTGCTTCGAAGAAAAGGACGTTCAGTGACATGAGCAATGGAGCAGAGAAAGTGAACAATGCATCTGGTGATGTCCCTTCTACTTCAGAGGAGCGAAATCCAGCTCCATCTTCTAACACAAGGACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_160154.p2 GENE.S_Transcript_160154~~S_Transcript_160154.p2 ORF type:complete len:149 (+),score=49.70 S_Transcript_160154:40-447(+)
MVEQSKVLNKPGAEKQTKRELFDALRQELEVPVLEKASKSVWELILDNNGLGKEVNETVERVFCRLSGREPPLFPASTSEAPPEEKEQEENPSSASKKRTFSDMSNGAEKVNNASGDVPSTSEERNPAPSSNTRT*

Click here to download the sequence:
Link to NCBI Protein BLAST