Transcript Information: S_Transcript_160161.p1


Annotated TAIR IDAT1G56420.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12530.1); Has 58 Blast hits to 58 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:21122772-21124234 | Reverse length=183
E-Value3E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6296733382112
Replicate 25.9399818039463
Replicate 34.374238686495
Condition 2: 8 Hour
Replicate 19.7057866186951
Replicate 27.1704643076047
Replicate 36.0121621449947
Condition 3: 24 Hour
Replicate 14.2009391328066
Replicate 25.5206720506487
Replicate 34.2036740675193


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_160161.p1 GENE.S_Transcript_160161~~S_Transcript_160161.p1 ORF type:5prime_partial len:156 (+),score=41.34 S_Transcript_160161:2-469(+)
ACCATGGTGGAACAAAGCAAAGTCCTCAACAAACCTGGGGCAGAGAAACAGACAAAAAGGGAGCTCTTTGATGCACTCAGGCTGGAGCTTGAAGTGCCTGTGCTGGAGAAGGCCTCTAAGTCGGTGTGGGAATTAATCTTGGATGATGAAAACGGGCTAGGGAAGGAAATTAGTGAAACTGTCGAAAGAGTGTTTTGTCGATTAAGCGGCCATGAGCCTCAGCCATGTCCTGCTTCAACCAGTGAGACCGAGCAGCAGGTGAAAGAGCGGGACGAGAATCCTAGCTCTGTGTTAAAAAAACGGAACTTCAGTGACATGAATGCAGGAGCAGAGAAAGAGAATACTGCATCTGATGATGTCCCCTCTACTGCAGAGGATAGGAATCCGGCCCCCTCTCCTAGTGTGAAGACATTAAGGCAAGTTTTCCAGCTTTCTCATCCCGTTTGGTGGATTAACAGTTCACTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_160161.p1 GENE.S_Transcript_160161~~S_Transcript_160161.p1 ORF type:5prime_partial len:156 (+),score=41.34 S_Transcript_160161:2-469(+)
TMVEQSKVLNKPGAEKQTKRELFDALRLELEVPVLEKASKSVWELILDDENGLGKEISETVERVFCRLSGHEPQPCPASTSETEQQVKERDENPSSVLKKRNFSDMNAGAEKENTASDDVPSTAEDRNPAPSPSVKTLRQVFQLSHPVWWINSSL*

Click here to download the sequence:
Link to NCBI Protein BLAST