Transcript Information: S_Transcript_160177.p1


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29902248578855
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.2396111271588
Replicate 20
Replicate 30.11975195283697
Condition 3: 24 Hour
Replicate 10
Replicate 20.12732478413678
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_160177.p1 GENE.S_Transcript_160177~~S_Transcript_160177.p1 ORF type:complete len:356 (-),score=60.05,Retrotrans_gag|PF03732.13|6.4e-09 S_Transcript_160177:401-1423(-)
ATGGACCAGCTCGAGACCGATATCATAAACAAGTTTGAAGCCACTGATAATGCCATCAAACTCATCCAAGACCAGCTGAACATGGACGATAGCACTACAGTAGAGGAAGACCCATATGATGGCACACTACTTAACGGGCCACCCAAGCCCAAGGGAGATCCAAGAGTTGAGAGGATAGAGAAAGCCATGAGAAACCATCCCATGTTCCAACAATTCTTTAGGGCTGAAGAAGAATGGGATGATCAAATGAAACACCATCTCCCAAATAAGATTGTTTTGAGTGACCTTCCAAAGTTCAAGGGGACCCAAAATCCCCGAAGCCACCTTCGTGGTTTCAAAACTTCCATGGTGGTCAAAGGAGTGCCTAAAGAGATGTATGTTCACCTTTTCTCCTTGACACTAGAAGGGGCAGCCAACGATTGGTTTGGTACCCTTAAGCCATCCAAGCTAAAAGACTGGGATATCCTTGAAGAAGAATTCTTAGCCCAGTACAAATACAATGTAGAGTTCCCAATAACCCAAAGGGAACTGGAGGTCACCAAGCAAAATGACGATGAAGGCTTCACAACCTTTCTTTCTCGATGGAGAGAAAAGGCGGCCCAAGTTGTCAATAGGCCATCTGAAAAAGACCAAGTGAGAATGTTCATAAAGAATCTCCAACCATCGTATACTCAACATTTGCGCTTTCAGCCAATTAGTACATTTGCCGAGTTATATGATGTAGGGATACAAATCGAAGACTCACTTTCACAAGAAAAGAAAACGGGTCAAAGAAGTGCTTCCAAAAGCAATGGTGTCAACGCCTTAGCCTCCACCAAGAGAAACTTCACAGACTTGGGCATGCCACTATCAAAAGCATTCAAGAAGCTTCAGAATAAAGGTCTCCTGCAACCCCTGCCACCATTTCCAGATCTTCCTCTGCATCGTAGGCCAAAAAATTGGGATGGAAATGCCTACTGCAATTTCCATAGTCAAAATGGGCACCTCACAGACAACTGCCCTCGGCTGAGGCATGAGATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_160177.p1 GENE.S_Transcript_160177~~S_Transcript_160177.p1 ORF type:complete len:356 (-),score=60.05,Retrotrans_gag|PF03732.13|6.4e-09 S_Transcript_160177:401-1423(-)
MDQLETDIINKFEATDNAIKLIQDQLNMDDSTTVEEDPYDGTLLNGPPKPKGDPRVERIEKAMRNHPMFQQFFRAEEEWDDQMKHHLPNKIVLSDLPKFKGTQNPRSHLRGFKTSMVVKGVPKEMYVHLFSLTLEGAANDWFGTLKPSKLKDWDILEEEFLAQYKYNVEFPITQRELEVTKQNDDEGFTTFLSRWREKAAQVVNRPSEKDQVRMFIKNLQPSYTQHLRFQPISTFAELYDVGIQIEDSLSQEKKTGQRSASKSNGVNALASTKRNFTDLGMPLSKAFKKLQNKGLLQPLPPFPDLPLHRRPKNWDGNAYCNFHSQNGHLTDNCPRLRHEI*

Click here to download the sequence:
Link to NCBI Protein BLAST