Transcript Information: S_Transcript_160270.p1


Annotated TAIR IDAT3G17350.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50290.1); Has 203 Blast hits to 203 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5934111-5935276 | Forward length=301
E-Value3E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3545799876278
Replicate 20.74160637168117
Replicate 31.2398478039395
Condition 2: 8 Hour
Replicate 10.35840992129635
Replicate 20.18799872806493
Replicate 30.35824953957952
Condition 3: 24 Hour
Replicate 10
Replicate 20.38090439624113
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_160270.p1 GENE.S_Transcript_160270~~S_Transcript_160270.p1 ORF type:internal len:119 (-),score=12.57,WAK_assoc|PF14380.2|4.6e-07 S_Transcript_160270:1-354(-)
CTCACGGTGAGGGCGATGAGGATGAATATATTGGATTGTACGCATTTTACAAGCTTCTATAATGTGGATCAGGTGAAAGGGGTATCGCCGATGGACTGGTCGTACGGGTTGAAGTTTAGCTACAGTGTGCCGGATATGGGGTGTGAGAGATGTGTTAAGTCTGGTGGGAATTGTGGGTTTGATGCTGAAACTGAAGCCTTGCTATGCCTTTGCTCTACTGCTAATAACTCCACCAGACAATGTGGCAGTGATACAGGGGCCAGTGAAGGCCGGACACCATCAACCAAACTTCAAGCTTTTATCATTGGCCTAGGATTTCTCTCCCTTCTTCCTCATTTATGCATAGTATCAACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_160270.p1 GENE.S_Transcript_160270~~S_Transcript_160270.p1 ORF type:internal len:119 (-),score=12.57,WAK_assoc|PF14380.2|4.6e-07 S_Transcript_160270:1-354(-)
LTVRAMRMNILDCTHFTSFYNVDQVKGVSPMDWSYGLKFSYSVPDMGCERCVKSGGNCGFDAETEALLCLCSTANNSTRQCGSDTGASEGRTPSTKLQAFIIGLGFLSLLPHLCIVST

Click here to download the sequence:
Link to NCBI Protein BLAST