Transcript Information: S_Transcript_160313.p1


Annotated TAIR IDAT1G61667.1
Annotated Gene NameProtein of unknown function, DUF538
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:22767674-22768269 | Forward length=156
E-Value5E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.66866837274323
Replicate 20.44347315693497
Replicate 31.1121247889608
Condition 2: 8 Hour
Replicate 10.32148829623819
Replicate 20.899370799587
Replicate 30.964033308768
Condition 3: 24 Hour
Replicate 10
Replicate 20.56944250191828
Replicate 32.2813909512165


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_160313.p1 GENE.S_Transcript_160313~~S_Transcript_160313.p1 ORF type:5prime_partial len:199 (+),score=21.40,DUF538|PF04398.8|2.6e-25 S_Transcript_160313:1-597(+)
AAAAAAACCACTCACTACTCTTCTAGCTTGCTCAATTCCTCATACAGTCAAAACATTACAAACACCCCCACAAAAAAAAAAAAAAAAAAAAAATCAACACCATTTTTGAAAATCATCATGATATCAAAAGCGTTAATTTTCTCAACTCTGCTATGTATGATCTCTGTTTCCTCTGTTTTATGCTCATCCATACATGACCTTCTGAAGAGTCAAGGACTTCCAGGAGGGCTGTTCCCCAAGAATGTCAAGTCTTATTATCTCCAAGAAGATGGAGTCTTAGAAGTTTACTTTGAGCAGCCATGCGAAGCCATGTTTGAGAGCTTGGTTCGATTCGATAGCGTGGTAAGGGCTAACCTTAGTTATGGTGGTCTCATTGGTGTTGAAGGACTTACACAAGAAGAGTTATTTCTTTGGCTTCCTGTTAAGGATATCATTGTTTCAGATCCTTCTTCTGGTCTCATTTTGTTCAACATTGGTGTTGCTCAGAAGCAGCTTGCCTTTTCTATCTTTGAAGACCCTCCTCTTTGCAAACCTCCATGTAATTTTCATCTCTCTTTTAATTCTTTTGCTTCTAAATCCCTGTTTTTTTTTTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_160313.p1 GENE.S_Transcript_160313~~S_Transcript_160313.p1 ORF type:5prime_partial len:199 (+),score=21.40,DUF538|PF04398.8|2.6e-25 S_Transcript_160313:1-597(+)
KKTTHYSSSLLNSSYSQNITNTPTKKKKKKKSTPFLKIIMISKALIFSTLLCMISVSSVLCSSIHDLLKSQGLPGGLFPKNVKSYYLQEDGVLEVYFEQPCEAMFESLVRFDSVVRANLSYGGLIGVEGLTQEELFLWLPVKDIIVSDPSSGLILFNIGVAQKQLAFSIFEDPPLCKPPCNFHLSFNSFASKSLFFFF*

Click here to download the sequence:
Link to NCBI Protein BLAST