Transcript Information: S_Transcript_160315.p1


Annotated TAIR IDAT1G61667.1
Annotated Gene NameProtein of unknown function, DUF538
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22767674-22768269 | Forward length=156
E-Value4.8E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.139209797113
Replicate 29.3300353850187
Replicate 38.5332062476361
Condition 2: 8 Hour
Replicate 13.2889905464235
Replicate 23.672990075179
Replicate 34.4540577085036
Condition 3: 24 Hour
Replicate 15.1080075823777
Replicate 25.7505193551926
Replicate 38.7837965589957


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_160315.p1 GENE.S_Transcript_160315~~S_Transcript_160315.p1 ORF type:5prime_partial len:201 (+),score=34.07,DUF538|PF04398.8|2.6e-25 S_Transcript_160315:1-603(+)
AAAAAAACCACTCACTACTCTTCTAGCTTGCTCAATTCCTCATACAGTCAAAACATTACAAACACCCCCACAAAAAAAAAAAAAAAAAAAAAATCAACACCATTTTTGAAAATCATCATGATATCAAAAGCGTTAATTTTCTCAACTCTGCTATGTATGATCTCTGTTTCCTCTGTTTTATGCTCATCCATACATGACCTTCTGAAGAGTCAAGGACTTCCAGGAGGGCTGTTCCCCAAGAATGTCAAGTCTTATTATCTCCAAGAAGATGGAGTCTTAGAAGTTTACTTTGAGCAGCCATGCGAAGCCATGTTTGAGAGCTTGGTTCGATTCGATAGCGTGGTAAGGGCTAACCTTAGTTATGGTGGTCTCATTGGTGTTGAAGGACTTACACAAGAAGAGTTATTTCTTTGGCTTCCTGTTAAGGATATCATTGTTTCAGATCCTTCTTCTGGTCTCATTTTGTTCAACATTGGTGTTGCTCAGAAGCAGCTTGCCTTTTCTATCTTTGAAGATCCTCCTGTTTGCAAACCTCCATTGTCATACATACACATGGCTGGAAGTGGAAGGAAGGAGAAGGGTGCTCATAAAGCTCAGAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_160315.p1 GENE.S_Transcript_160315~~S_Transcript_160315.p1 ORF type:5prime_partial len:201 (+),score=34.07,DUF538|PF04398.8|2.6e-25 S_Transcript_160315:1-603(+)
KKTTHYSSSLLNSSYSQNITNTPTKKKKKKKSTPFLKIIMISKALIFSTLLCMISVSSVLCSSIHDLLKSQGLPGGLFPKNVKSYYLQEDGVLEVYFEQPCEAMFESLVRFDSVVRANLSYGGLIGVEGLTQEELFLWLPVKDIIVSDPSSGLILFNIGVAQKQLAFSIFEDPPVCKPPLSYIHMAGSGRKEKGAHKAQR*

Click here to download the sequence:
Link to NCBI Protein BLAST