Transcript Information: S_Transcript_160539.p2


Annotated TAIR IDAT2G07050.1
Annotated Gene Namecycloartenol synthase 1
Annotated Gene Symbol(s)CAS1
Annotation TypeOrtholog
Chromosome Positionchr2:2924629-2930295 | Forward length=759
E-Value1.4E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.580600325195
Replicate 222.157887788366
Replicate 325.040783906613
Condition 2: 8 Hour
Replicate 122.796106890728
Replicate 223.721873988676
Replicate 326.001658931939
Condition 3: 24 Hour
Replicate 130.13087378013
Replicate 227.059809511415
Replicate 327.396358577971


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_160539.p2 GENE.S_Transcript_160539~~S_Transcript_160539.p2 ORF type:3prime_partial len:232 (-),score=30.26,SQHop_cyclase_C|PF13243.2|8.6e-32,Prenyltrans|PF00432.17|6.8,Prenyltrans|PF00432.17|3.5e-11,Prenyltrans|PF00432.17|4.8e-10 S_Transcript_160539:1-693(-)
ATGTTGTTCAGATGTATCTTCCAATATCTAAAATCATTTTATCTTCAGGCTGTTCTTTCATTGTCCAAAATTCCGTCAGAAATTGTTGGTGAGCCACTGGAAGTTAACCGCTTGTATGATGCCGTAAATGTAATCCTATCCCTACAGAATGTTGATGGAGGATTTGCAACGTATGAGCTCACACGATCCTACCTTTGGCTAGAGATTATTAACCCAGCTGAAACATTTGGCGATATTGTCATTGATTATCCCTATGTCGAGTGTACCTCAGCCTCAATCCAAGCCCTAGTATCATTTAGAAGATTGTATCCTGGTCATAGGAGAGACGAGATAGAGGATTGTATCAATCGAGCTCTGAGGTTCATCGAAAAGATACAAGCAGCAGATGGTTCATGGTATGGTTCCTGGGGAGTCTGCTTCACATATGGTACATGGTTTGGAGTCAAGGGTTTGGTTGCTGCTGGAAAGACCTATGATAACTGTCCGAGCATCCGGAAAGCCTGTGCATTTCTGTTGTCGAAACAGCTTGATTGTGGTGGCTGGGGAGAGAGTTACCTTTCATGTCAAAACAAGGTGTATTCGCATATTGAAGGGAACAAAGGTCATGTAGTCAACACAGGATGGGCCATGCTGGCTCTTATTGGAGCTGGACAGGCTGAAAGAGATCCATTGCCATTGCACCGTGGTGCTAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_160539.p2 GENE.S_Transcript_160539~~S_Transcript_160539.p2 ORF type:3prime_partial len:232 (-),score=30.26,SQHop_cyclase_C|PF13243.2|8.6e-32,Prenyltrans|PF00432.17|6.8,Prenyltrans|PF00432.17|3.5e-11,Prenyltrans|PF00432.17|4.8e-10 S_Transcript_160539:1-693(-)
MLFRCIFQYLKSFYLQAVLSLSKIPSEIVGEPLEVNRLYDAVNVILSLQNVDGGFATYELTRSYLWLEIINPAETFGDIVIDYPYVECTSASIQALVSFRRLYPGHRRDEIEDCINRALRFIEKIQAADGSWYGSWGVCFTYGTWFGVKGLVAAGKTYDNCPSIRKACAFLLSKQLDCGGWGESYLSCQNKVYSHIEGNKGHVVNTGWAMLALIGAGQAERDPLPLHRGAK

Click here to download the sequence:
Link to NCBI Protein BLAST