Transcript Information: S_Transcript_160639.p1


Annotated TAIR IDAT5G21222.1
Annotated Gene Nameprotein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7209422-7213700 | Forward length=831
E-Value2.5E-85
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5688225130483
Replicate 22.6407199856485
Replicate 33.6315812365391
Condition 2: 8 Hour
Replicate 10.41168707175932
Replicate 20.25913338192733
Replicate 30.24690170971021
Condition 3: 24 Hour
Replicate 17.5065429755324
Replicate 26.3878696720979
Replicate 33.8952964332226


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_160639.p1 GENE.S_Transcript_160639~~S_Transcript_160639.p1 ORF type:5prime_partial len:259 (-),score=42.32,PPR_2|PF13041.2|7.4e-13,PPR_2|PF13041.2|3.1e-14,PPR_2|PF13041.2|6e-06,PPR_2|PF13041.2|5.2e-13,PPR_2|PF13041.2|9.4e-09,PPR_1|PF12854.3|0.00022,PPR_1|PF12854.3|1e-07,PPR_1|PF12854.3|0.00021,PPR_1|PF12854.3|2.4e-05,PPR_1|PF12854.3|9e-07,PPR_1|PF12854.3|0.0088,PPR|PF01535.16|3.3e-06,PPR|PF01535.16|4e-07,PPR|PF01535.16|7.1,PPR|PF01535.16|8.5e-07,PPR|PF01535.16|8.7e-05,PPR|PF01535.16|53,PPR_3|PF13812.2|0.00034,PPR_3|PF13812.2|0.00059,PPR_3|PF13812.2|7.5,PPR_3|PF13812.2|0.00054,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|7.7e+02 S_Transcript_160639:98-874(-)
ATACCCTTTTCTTCCACCATAGAGATGAGAGAAGGAATAGACCAGATCTTCTTCTTCAATGCTGCCATCAATGCTTATTGTGAAGTTGGTGACATGAAAGGAGCTATGAAACTCTTTTACAAGATGAGAGGGGGTGGCTGCAAACCCACTACTAGTACTTTTAATACCTTGATGAAAGGCTATGGGCGTGTTGGGAAGCCTGAAGAATCATTCAAGTTATTAGAGCTTATGTCAGAAAGGGACAATGTCAAGCCAAATGACATGACTTACAATATACTAGTTCGAGCCTGGTGCAACAAGAACATAAATGAAGCATGGAATATAGTGTATAAAATGGTGGCCTCTGGTCGGCAACCTGATGTTGTCACCTACAACACAATGGCAAGAGCTTATGCTCAGCGTGGGGAGACTATTAAAGCTGAGGCAATGATACATGAAATGCAGAAAAACAAAATCAAGCCCAATGAACGAACATGTGGTATCATTGTCAGTGGCTATTGCGCTGAGGGAAACATGGTTGATGCTTTGCGTTTTCTATATCGTATGAAAGATCTAGGGGTGCACCCAAACCTTGTCGTGTTTAACTCCCTCATCAAGGGGTTCTTGGACATTATGGACACTGACGGAGTTGATGAGGTAAAGATTCTTTTCCATTCACCACAATATTTATGTATTATTACTATTGTCTTCACTCATGTGACAAAGGTTCAGCCTAGCAAATCCTCCCTTACATTCACTTACCTTCATCAAATATATGTCCTTCCACTAATTTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_160639.p1 GENE.S_Transcript_160639~~S_Transcript_160639.p1 ORF type:5prime_partial len:259 (-),score=42.32,PPR_2|PF13041.2|7.4e-13,PPR_2|PF13041.2|3.1e-14,PPR_2|PF13041.2|6e-06,PPR_2|PF13041.2|5.2e-13,PPR_2|PF13041.2|9.4e-09,PPR_1|PF12854.3|0.00022,PPR_1|PF12854.3|1e-07,PPR_1|PF12854.3|0.00021,PPR_1|PF12854.3|2.4e-05,PPR_1|PF12854.3|9e-07,PPR_1|PF12854.3|0.0088,PPR|PF01535.16|3.3e-06,PPR|PF01535.16|4e-07,PPR|PF01535.16|7.1,PPR|PF01535.16|8.5e-07,PPR|PF01535.16|8.7e-05,PPR|PF01535.16|53,PPR_3|PF13812.2|0.00034,PPR_3|PF13812.2|0.00059,PPR_3|PF13812.2|7.5,PPR_3|PF13812.2|0.00054,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|7.7e+02 S_Transcript_160639:98-874(-)
IPFSSTIEMREGIDQIFFFNAAINAYCEVGDMKGAMKLFYKMRGGGCKPTTSTFNTLMKGYGRVGKPEESFKLLELMSERDNVKPNDMTYNILVRAWCNKNINEAWNIVYKMVASGRQPDVVTYNTMARAYAQRGETIKAEAMIHEMQKNKIKPNERTCGIIVSGYCAEGNMVDALRFLYRMKDLGVHPNLVVFNSLIKGFLDIMDTDGVDEVKILFHSPQYLCIITIVFTHVTKVQPSKSSLTFTYLHQIYVLPLIS*

Click here to download the sequence:
Link to NCBI Protein BLAST