Transcript Information: S_Transcript_160769.p1


Annotated TAIR IDAT1G60360.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22242748-22243731 | Reverse length=327
E-Value6.8E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7077181489283
Replicate 22.7578486946894
Replicate 32.4661798251326
Condition 2: 8 Hour
Replicate 11.9217648250905
Replicate 21.3006888744027
Replicate 31.5491168317574
Condition 3: 24 Hour
Replicate 12.7941130046109
Replicate 21.4494298101152
Replicate 33.079435654113


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_160769.p1 GENE.S_Transcript_160769~~S_Transcript_160769.p1 ORF type:complete len:344 (+),score=55.35,zf-RING_2|PF13639.2|3.6e+02,zf-RING_2|PF13639.2|2.9e-12,zf-RING_2|PF13639.2|5.3e+03,zinc_ribbon_9|PF14369.2|2e-10,zinc_ribbon_9|PF14369.2|75,zinc_ribbon_9|PF14369.2|2.4e+03,zf-RING_11|PF17123.1|4.1e-08,zf-RING_11|PF17123.1|8.7e+03,zf-C3HC4|PF00097.21|1.7e+02,zf-C3HC4|PF00097.21|1.3e-06,zf-rbx1|PF12678.3|5.5e+03,zf-rbx1|PF12678.3|4.8e-06,zf-C3HC4_2|PF13923.2|3.3e+03,zf-C3HC4_2|PF13923.2|6.5e-06 S_Transcript_160769:199-1230(+)
ATGTCTTTGAGCCCACCTCGTACGAGACCCAACCAGACTTCTAACTATAACCTTTATTGGTGCTACCAATGCCGACGGGCTGTCAGGATTGCGTCCGACAACCCGTCGGAGGTTGTTTGTCCTCGTTGTTATTGTCATTTTGTTAGTGAGATGGAAGTCCCTCGTCCTAGATTGGTTGTGGATTACACTGACTTTGACCCTTCTCCTGAGGCCCGCCTTTTGGAAGCCTTGGCACTCATGCTCGAACCTCCCTTGAGGATTAGGGCTCGTGAACCTGATGGTTCATGGGCTTTGCCTCGTGGGGGCTCTCGACGAAATATTGTGGTTCATGGACCTGTGGAATCAGGCCGTGATAGATGGGCTCGTGTCCCAAGGCCCACACATCATAGGGATGATTGGGAAGTTGAGCCAGGGATTCGAGCCCCAAGAAGATCTTGGATTATACTCAGGCCAGTGGGCCAGCCTCCAGCTGGAATGGGGCCAATGGGCCCCATTTCCAGGCATGGGGGACTAATCCCAAATGGGGTTGACTCTAGAAATTACTTCCTTGGGTCAGGCCTGCAGGAGTTGATAGATGAGCTGACTGAGAATGATCGGCAGGGGCCACCACCAGCACCAGACTCAGCAATCGAGGCAGTGCCAACAGTGAAGGTGACGGAGCAACATATGGCAGAAGAGGGCCCACAGTGTCCTGTATGCAAGGAGGATTTTGAGATAGGAACTGAGGCTAGGGAATTGCCCTGTAAACATGTGTACCATTCTCAATGTATTGTGCCTTGGCTAAGGCTTCATAATTCTTGCCCAGTTTGTAGAACTGAGCTACCAGCTGTGCAGTGTGAAAATGAAAGAGCTGAATCTGATGGTTCGAGCATCGAAGATGGTAGGCACCGGAGGTGCCTGAATTGGAACAGATTGGCTTCAATCTGGCCCTTTCGTTCGAGGTATCGAAGGATAAGTCCCCACGATGAATCTGCAAGGACTAATTCAACTGGAGCGGCGCAGTCCAGGCAACGGTTCTGCTATGTCCTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_160769.p1 GENE.S_Transcript_160769~~S_Transcript_160769.p1 ORF type:complete len:344 (+),score=55.35,zf-RING_2|PF13639.2|3.6e+02,zf-RING_2|PF13639.2|2.9e-12,zf-RING_2|PF13639.2|5.3e+03,zinc_ribbon_9|PF14369.2|2e-10,zinc_ribbon_9|PF14369.2|75,zinc_ribbon_9|PF14369.2|2.4e+03,zf-RING_11|PF17123.1|4.1e-08,zf-RING_11|PF17123.1|8.7e+03,zf-C3HC4|PF00097.21|1.7e+02,zf-C3HC4|PF00097.21|1.3e-06,zf-rbx1|PF12678.3|5.5e+03,zf-rbx1|PF12678.3|4.8e-06,zf-C3HC4_2|PF13923.2|3.3e+03,zf-C3HC4_2|PF13923.2|6.5e-06 S_Transcript_160769:199-1230(+)
MSLSPPRTRPNQTSNYNLYWCYQCRRAVRIASDNPSEVVCPRCYCHFVSEMEVPRPRLVVDYTDFDPSPEARLLEALALMLEPPLRIRAREPDGSWALPRGGSRRNIVVHGPVESGRDRWARVPRPTHHRDDWEVEPGIRAPRRSWIILRPVGQPPAGMGPMGPISRHGGLIPNGVDSRNYFLGSGLQELIDELTENDRQGPPPAPDSAIEAVPTVKVTEQHMAEEGPQCPVCKEDFEIGTEARELPCKHVYHSQCIVPWLRLHNSCPVCRTELPAVQCENERAESDGSSIEDGRHRRCLNWNRLASIWPFRSRYRRISPHDESARTNSTGAAQSRQRFCYVL*

Click here to download the sequence:
Link to NCBI Protein BLAST